RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SDCBPO00560 298 aaPredicted RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TNFP01375 233 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 IGHV1-46P01743 117 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 SLC25A6P12236 298 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 HMGA1P17096 107 aaKnown RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 CRYBB3P26998 211 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF93P35789 620 aaPredicted RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 KRTDAPP60985 99 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 CATR1Q13166 79 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 EDDM3AQ14507 147 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 C2orf83Q53S99 150 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 C1orf140Q5VVS0 124 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 Q6Q795 121 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 ZFP2Q6ZN57 461 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TMEM86BQ8N661 226 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TEX29Q8N6K0 151 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 SPANXA2-OT1Q8N9U9 137 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 OR8B12Q8NGG6 310 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 ATP6V0E2Q8NHE4 81 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 FNDC9Q8TBE3 224 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 MRPL30Q8TCC3 161 aaKnown RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF721Q8TF20 911 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 GNPNAT1Q96EK6 184 aaPredicted RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 SLC25A44Q96H78 314 aaPredicted RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 GPER1Q99527 375 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 RPRMQ9NS64 109 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 CCL26Q9Y258 94 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 SPCS1Q9Y6A9 102 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 TET2Q6N021 2002 aaPredicted RBP2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 CABIN1Q9Y6J0 2220 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 APCP25054 2843 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 OBSL1O75147 1896 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 CPAMD8Q8IZJ3 1885 aa2.5□□□□□ -2.01
SFSWAP-211ENST00000542813 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 CRYM-AS1A6NIL9 109 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 K7ERS5 55 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 PITX3O75364 302 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 APOA2P02652 100 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 CRYGDP07320 174 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 CISD3P0C7P0 127 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 C3orf79P0CE67 100 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 BCL2P10415 239 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 SPTBP11277 2137 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 FABP2P12104 132 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 CPMP14384 443 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 PEBP1P30086 187 aaKnown RBP2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 DYNLT3P51808 116 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 HERVK_113P63121 156 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 NUMA1Q14980 2115 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 Q6AWC8 147 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 Q6ZUT4 128 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 LYZL2Q7Z4W2 148 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 BAGE3Q86Y29 109 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 BAGE2Q86Y30 109 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 AMN1Q8IY45 258 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 OR5AS1Q8N127 324 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 OSR2Q8N2R0 312 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 OR1L8Q8NGR8 309 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 SGMS2Q8NHU3 365 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 OTOSQ8NHW6 89 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 UBALD1Q8TB05 177 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 MBD3L1Q8WWY6 194 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 ADAT3Q96EY9 351 aaPredicted RBP2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 ABHD14BQ96IU4 210 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 SPANXDQ9BXN6 97 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 MRPL32Q9BYC8 188 aaKnown RBP2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 OR2D2Q9H210 308 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 ENY2Q9NPA8 101 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF492Q9P255 531 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 GNG13Q9P2W3 67 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 TP73-AS1Q9UF72 201 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 RABAC1Q9UI14 185 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 TRPM6Q9BX84 2022 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 KNTC1P50748 2209 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 CRYBG3Q68DQ2 2970 aa2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
SFSWAP-211ENST00000542813 SNRNP200O75643 2136 aaKnown RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 KIAA2026Q5HYC2 2103 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 TRGV10A0A0A0MS01 117 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 IGHV3-21A0A0B4J1V1 117 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 LOC102725191A0A1B0GVB3 256 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 GRIFINA4D1Z8 144 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF850A8MQ14 1090 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 CEBPZOSA8MTT3 80 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 FNDC10F2Z333 226 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 CCDC179H3BU77 68 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF737O75373 536 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF324O75467 553 aaPredicted RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 OR7C1O76099 320 aaPredicted RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 LHBP01229 141 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 GYPAP02724 150 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 MT-ND6P03923 174 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 IFITM1P13164 125 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 CTLA4P16410 223 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 NPPCP23582 126 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 GLRXP35754 106 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 TNFAIP6P98066 277 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms