RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RBMY1BA6NDE4 496 aaKnown RBP12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 RBMY1EA6NEQ0 496 aaKnown RBP12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 RBMY1DP0C7P1 496 aaKnown RBP12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 ASIPP42127 132 aa12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 PROK1P58294 105 aa12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.36
TMEM50B-210ENST00000542230 RBMY1A1P0DJD3 496 aaKnown RBP12.77□□□□□ -0.37
TMEM50B-210ENST00000542230 RBMY1CP0DJD4 496 aa12.77□□□□□ -0.37
TMEM50B-210ENST00000542230 RBMY1FQ15415 496 aaKnown RBP12.77□□□□□ -0.37
TMEM50B-210ENST00000542230 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.37
TMEM50B-210ENST00000542230 CHCHD1Q96BP2 118 aaKnown RBP12.77□□□□□ -0.37
TMEM50B-210ENST00000542230 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 ATOH7Q8N100 152 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 MCRIP2Q9BUT9 160 aaKnown RBP12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 ZNF256Q9Y2P7 627 aaPredicted RBP12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 CD7P09564 240 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 CDKN1BP46527 198 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 JPT2Q9H910 190 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
TMEM50B-210ENST00000542230 A0A096LNJ9 63 aa12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 S100A12P80511 92 aa12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 AP5S1Q9NUS5 200 aa12.75□□□□□ -0.37
TMEM50B-210ENST00000542230 H3BMM0 161 aa12.74□□□□□ -0.37
TMEM50B-210ENST00000542230 LEPP41159 167 aa12.74□□□□□ -0.37
TMEM50B-210ENST00000542230 CRXO43186 299 aaPredicted RBP12.73□□□□□ -0.37
TMEM50B-210ENST00000542230 TNFRSF6BO95407 300 aa12.73□□□□□ -0.37
TMEM50B-210ENST00000542230 MAJINQ3KP22 176 aa12.73□□□□□ -0.37
TMEM50B-210ENST00000542230 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
TMEM50B-210ENST00000542230 Q8N1Y9 231 aa12.73□□□□□ -0.37
TMEM50B-210ENST00000542230 LEPROTL1O95214 131 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 HTN1P15515 57 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 PKIAP61925 76 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 TEX43Q6ZNM6 134 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 TCF21O43680 179 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 NDUFA7O95182 113 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 CACNG7P62955 275 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 ODF3L2Q3SX64 289 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
TMEM50B-210ENST00000542230 H0Y8G0 127 aa12.71□□□□□ -0.37
TMEM50B-210ENST00000542230 DUSP14O95147 198 aaKnown RBP12.71□□□□□ -0.37
TMEM50B-210ENST00000542230 NRACQ8N912 160 aa12.71□□□□□ -0.38
TMEM50B-210ENST00000542230 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
TMEM50B-210ENST00000542230 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
TMEM50B-210ENST00000542230 OR4C46A6NHA9 309 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 SAP30O75446 220 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 TSTD3H0UI37 97 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 TSPOP30536 169 aa12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
TMEM50B-210ENST00000542230 A0A087WWL8 130 aa12.68□□□□□ -0.38
TMEM50B-210ENST00000542230 PPBPP02775 128 aa12.68□□□□□ -0.38
TMEM50B-210ENST00000542230 MGPP08493 103 aa12.68□□□□□ -0.38
TMEM50B-210ENST00000542230 DDTP30046 118 aa12.68□□□□□ -0.38
TMEM50B-210ENST00000542230 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 JMJD8Q96S16 334 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 TMEM70Q9BUB7 260 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 LINC00315P59091 139 aa12.67□□□□□ -0.38
TMEM50B-210ENST00000542230 A8MTW9 85 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 MED14OSP0DP75 135 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 DEFB104AQ8WTQ1 72 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 RASL10AQ92737 203 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 ZNF747Q9BV97 191 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 BAHCC1Q9P281 2608 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 NXPH4O95158 308 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 VAMP8Q9BV40 100 aa12.66□□□□□ -0.38
TMEM50B-210ENST00000542230 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 NBEAL2Q6ZNJ1 2754 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 TCAPO15273 167 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 KIR2DL5AQ8N109 375 aa12.65□□□□□ -0.38
TMEM50B-210ENST00000542230 CBY3A6NI87 242 aa12.64□□□□□ -0.39
TMEM50B-210ENST00000542230 AP1S3Q96PC3 154 aa12.64□□□□□ -0.39
TMEM50B-210ENST00000542230 XCL2Q9UBD3 114 aa12.64□□□□□ -0.39
TMEM50B-210ENST00000542230 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
TMEM50B-210ENST00000542230 C18orf15Q96N68 181 aa12.63□□□□□ -0.39
TMEM50B-210ENST00000542230 LAMTOR2Q9Y2Q5 125 aa12.63□□□□□ -0.39
TMEM50B-210ENST00000542230 TRAV25A0A0B4J276 109 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 CRLF1O75462 422 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms