RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SPHKAPQ2M3C7 1700 aa1.83□□□□□ -2.12
LEMD3-204ENST00000542032 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.83□□□□□ -2.12
LEMD3-204ENST00000542032 CASZ1Q86V15 1759 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 MYO9BQ13459 2157 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 MUC4Q99102 2169 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 ARHGAP5Q13017 1502 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 PLXNA2O75051 1894 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 DOCK1Q14185 1865 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 C2orf70A6NJV1 201 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 CBLN1P23435 193 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 POLR2JP52435 117 aaKnown RBP1.82□□□□□ -2.12
LEMD3-204ENST00000542032 CMTM2Q8TAZ6 248 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 ZNF431Q8TF32 576 aaPredicted RBP1.82□□□□□ -2.12
LEMD3-204ENST00000542032 NINQ8N4C6 2090 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 HEATR5BQ9P2D3 2071 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 COL24A1Q17RW2 1714 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 FYCO1Q9BQS8 1478 aa1.82□□□□□ -2.12
LEMD3-204ENST00000542032 SDK2Q58EX2 2172 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 SLC25A6P12236 298 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 RHOHQ15669 191 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 SPRNQ5BIV9 151 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
LEMD3-204ENST00000542032 ZNF833PQ6ZTB9 187 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 COMMD6Q7Z4G1 85 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 C10orf71Q711Q0 1435 aa1.81□□□□□ -2.12
LEMD3-204ENST00000542032 MAGI1Q96QZ7 1491 aaPredicted RBP1.81□□□□□ -2.12
LEMD3-204ENST00000542032 CHD3Q12873 2000 aaKnown RBP1.8□□□□□ -2.12
LEMD3-204ENST00000542032 IGKV1D-17A0A075B6S4 117 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 hADV29S1A0JD25 119 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 TFF1P04155 84 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 ASIPP42127 132 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 PEA15Q15121 130 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 ELOBQ15370 118 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 Q1T7F1 81 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 C6orf52Q5T4I8 152 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 SLC48A1Q6P1K1 146 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 KRTAP26-1Q6PEX3 210 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 UNQ5815/PRO19632Q6UWF5 114 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 PPDPFLQ8WWR9 84 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 PMCHL2Q9BQD1 86 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 TIMM21Q9BVV7 248 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 RTEL1-TNFRSF6BF6WH68 1400 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 ABCC5O15440 1437 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 CPSF1Q10570 1443 aaKnown RBP1.8□□□□□ -2.12
LEMD3-204ENST00000542032 PLEKHH2Q8IVE3 1493 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 ADGRB3O60242 1522 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 CC2D2AQ9P2K1 1620 aa1.8□□□□□ -2.12
LEMD3-204ENST00000542032 FREM3P0C091 2139 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 SEC16AO15027 2179 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 HIVEP2P31629 2446 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 IGKCP01834 107 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 GYPAP02724 150 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 CCKP06307 115 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 CNBPP62633 177 aaKnown RBP1.79□□□□□ -2.12
LEMD3-204ENST00000542032 PDE6HQ13956 83 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 FAM74A1Q5RGS3 127 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.79□□□□□ -2.12
LEMD3-204ENST00000542032 C15orf53Q8NAA6 179 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 OR10AG1Q8NH19 301 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 C10orf82Q8WW14 230 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 CASKIN1Q8WXD9 1431 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 GAPVD1Q14C86 1478 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 SLIT2O94813 1529 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 SMARCA4P51532 1647 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 ABCA3Q99758 1704 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 STRCQ7RTU9 1775 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 RP1P56715 2156 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 GPR179Q6PRD1 2367 aa1.79□□□□□ -2.12
LEMD3-204ENST00000542032 ANK1P16157 1881 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 KIAA1549LQ6ZVL6 1849 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 LRP5O75197 1615 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 KDM5DQ9BY66 1539 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 DAPK1P53355 1430 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 SCAPERQ9BY12 1400 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 A0A0G2JQZ4 141 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 F8W1H4 67 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 K7EP34 96 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 CYB5AP00167 134 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 FAUP35544 74 aaKnown RBP1.78□□□□□ -2.12
LEMD3-204ENST00000542032 KRTDAPP60985 99 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 GNG11P61952 73 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 IGFBP7Q16270 282 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 MYOZ3Q8TDC0 251 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 C4orf3Q8WVX3 66 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 S100A13Q99584 98 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 MRPL35Q9NZE8 188 aaKnown RBP1.78□□□□□ -2.12
LEMD3-204ENST00000542032 LINC00474Q9P2X8 69 aa1.78□□□□□ -2.12
LEMD3-204ENST00000542032 SNRNP200O75643 2136 aaKnown RBP1.78□□□□□ -2.13
LEMD3-204ENST00000542032 ARAP2Q8WZ64 1704 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 IFT140Q96RY7 1462 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 RRBP1Q9P2E9 1410 aaKnown RBP1.77□□□□□ -2.13
LEMD3-204ENST00000542032 ANKRD36BQ8N2N9 1353 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 TRAV13-2A0A0B4J235 113 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 TRBV10-3A0A0K0K1G6 114 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms