RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 LINC00694P0DN24 101 aa8.6□□□□□ -1.03
SCARB1-207ENST00000541661 LRRC37A5PQ49AS3 106 aa8.6□□□□□ -1.03
SCARB1-207ENST00000541661 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
SCARB1-207ENST00000541661 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
SCARB1-207ENST00000541661 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
SCARB1-207ENST00000541661 TCTE3Q8IZS6 198 aa8.6□□□□□ -1.03
SCARB1-207ENST00000541661 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
SCARB1-207ENST00000541661 SERTM2A0A1B0GWG4 89 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 TAAR5O14804 337 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCARB1-207ENST00000541661 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
SCARB1-207ENST00000541661 ZNF506Q5JVG8 444 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 Q8N976 141 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 HSPB11Q9Y547 144 aa8.59□□□□□ -1.03
SCARB1-207ENST00000541661 RNF222A6NCQ9 220 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 GGTLC3B5MD39 225 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
SCARB1-207ENST00000541661 GNG5P63218 68 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 SCGB1C1Q8TD33 95 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 NDFIP1Q9BT67 221 aa8.58□□□□□ -1.04
SCARB1-207ENST00000541661 A0A087WWC5 75 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 ACOT6Q3I5F7 207 aaPredicted RBP8.57□□□□□ -1.04
SCARB1-207ENST00000541661 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 PARLQ9H300 379 aa8.57□□□□□ -1.04
SCARB1-207ENST00000541661 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GAGE12JA6NER3 117 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 A8MWV9 139 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GCGP01275 180 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 H2BFSP57053 126 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GAGE1Q13065 139 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GAGE4Q13068 117 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GAGE5Q13069 117 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 CYB561D1Q8N8Q1 229 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 PPP1R1CQ8WVI7 109 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 RMI2Q96E14 147 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 MED28Q9H204 178 aa8.56□□□□□ -1.04
SCARB1-207ENST00000541661 MPC2O95563 127 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 IGLV2-11P01706 119 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 IGLV2-8P01709 118 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 TCRAP04437 139 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 RPL12P30050 165 aaKnown RBP8.55□□□□□ -1.04
SCARB1-207ENST00000541661 FGF8P55075 233 aaPredicted RBP8.55□□□□□ -1.04
SCARB1-207ENST00000541661 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 C5orf17Q8NAS9 161 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 SUN5Q8TC36 379 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 SMIM3Q9BZL3 60 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 Q9UF83 564 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 PSG8Q9UQ74 426 aa8.55□□□□□ -1.04
SCARB1-207ENST00000541661 K7EQM0 130 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 RAB2AP61019 212 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 ZFP69Q49AA0 526 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 NIT1Q86X76 327 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 WFDC1Q9HC57 220 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 PLA2G2DQ9UNK4 145 aa8.54□□□□□ -1.04
SCARB1-207ENST00000541661 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 HMGB3O15347 200 aaKnown RBP8.53□□□□□ -1.04
SCARB1-207ENST00000541661 STAG3L2P0CL84 134 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 STAG3L3P0CL85 134 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 PET100P0DJ07 73 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 ARL14EPLP0DKL9 152 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 FLI1Q01543 452 aaPredicted RBP8.53□□□□□ -1.04
SCARB1-207ENST00000541661 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
SCARB1-207ENST00000541661 OR10G9Q8NGN4 311 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 OR10G7Q8NGN6 311 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 OR2T35Q8NGX2 323 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 DNAJC30Q96LL9 226 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 SAMD10Q9BYL1 202 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
SCARB1-207ENST00000541661 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.05
SCARB1-207ENST00000541661 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 ATRAIDQ6UW56 229 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 CHCHD7Q9BUK0 85 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 JPT2Q9H910 190 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 URGCP-MRPS24S4R325 110 aa8.52□□□□□ -1.05
SCARB1-207ENST00000541661 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
SCARB1-207ENST00000541661 PRNTQ86SH4 94 aa8.51□□□□□ -1.05
SCARB1-207ENST00000541661 IL36BQ9NZH7 164 aa8.51□□□□□ -1.05
SCARB1-207ENST00000541661 SSNA1O43805 119 aa8.5□□□□□ -1.05
SCARB1-207ENST00000541661 GIPP09681 153 aaPredicted RBP8.5□□□□□ -1.05
SCARB1-207ENST00000541661 S100A4P26447 101 aaKnown RBP8.5□□□□□ -1.05
SCARB1-207ENST00000541661 GCHFRP30047 84 aa8.5□□□□□ -1.05
SCARB1-207ENST00000541661 ASIPP42127 132 aa8.5□□□□□ -1.05
SCARB1-207ENST00000541661 CDC34P49427 236 aaPredicted RBP8.5□□□□□ -1.05
SCARB1-207ENST00000541661 ELOBQ15370 118 aa8.5□□□□□ -1.05
SCARB1-207ENST00000541661 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
SCARB1-207ENST00000541661 OR2G3Q8NGZ4 309 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms