RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
DDB1-218ENST00000540784 IGHV4-4A0A075B6R2 117 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 IGHV3-53P01767 116 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 CXCL1P09341 107 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 SOHLH1Q5JUK2 328 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 PHLDA3Q9Y5J5 127 aa10.92□□□□□ -0.66
DDB1-218ENST00000540784 XKRY2A2RUG3 117 aa10.91□□□□□ -0.66
DDB1-218ENST00000540784 HOXA5P20719 270 aa10.91□□□□□ -0.66
DDB1-218ENST00000540784 TMEM88Q6PEY1 159 aa10.91□□□□□ -0.66
DDB1-218ENST00000540784 SYT8Q8NBV8 401 aa10.91□□□□□ -0.66
DDB1-218ENST00000540784 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
DDB1-218ENST00000540784 SCRT2Q9NQ03 307 aa10.91□□□□□ -0.66
DDB1-218ENST00000540784 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 NAT8Q9UHE5 227 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
DDB1-218ENST00000540784 TRAV4A0A0B4J268 109 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 RS1O15537 224 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 GATCO43716 136 aaKnown RBP10.89□□□□□ -0.67
DDB1-218ENST00000540784 GZMBP10144 247 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 SLAQ13239 276 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 FHL2Q14192 279 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 POM121L12Q8N7R1 296 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 ZNF479Q96JC4 524 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
DDB1-218ENST00000540784 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
DDB1-218ENST00000540784 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
DDB1-218ENST00000540784 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 M0R381 172 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 CIDEAO60543 219 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 CFAP126Q5VTH2 177 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 FAM231DQ6ZW35 169 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 ZFP82Q8N141 532 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
DDB1-218ENST00000540784 A0A0J9YY99 117 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 A8MWV9 139 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
DDB1-218ENST00000540784 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 TPPP3Q9BW30 176 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
DDB1-218ENST00000540784 DYNC2H1Q8NCM8 4307 aaKnown RBP10.87□□□□□ -0.67
DDB1-218ENST00000540784 A0A1W2PPQ1 181 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 F2Z2F3 143 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 PAX4O43316 350 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 SNAI2O43623 268 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 SSTP61278 116 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 ADIRFQ15847 76 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 UQCC3Q6UW78 93 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 C15orf53Q8NAA6 179 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 OSTCQ9NRP0 149 aa10.86□□□□□ -0.67
DDB1-218ENST00000540784 STARD9Q9P2P6 4700 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 TENM2Q9NT68 2774 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 A8MWL6 223 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 H3BNG1 76 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 NUDT3O95989 172 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 IGLC6P0CF74 106 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 CRYBA4P53673 196 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 OR10AG1Q8NH19 301 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 ISOC2Q96AB3 205 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
DDB1-218ENST00000540784 IGHV3-73A0A0B4J1V6 119 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 LINC00862A6NCI5 91 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 COMMD7Q86VX2 200 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 VSIG2Q96IQ7 327 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 JPT2Q9H910 190 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 MUC4Q99102 2169 aa10.84□□□□□ -0.67
DDB1-218ENST00000540784 CACNG7P62955 275 aa10.83□□□□□ -0.68
DDB1-218ENST00000540784 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
DDB1-218ENST00000540784 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
DDB1-218ENST00000540784 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
DDB1-218ENST00000540784 NXPH4O95158 308 aa10.82□□□□□ -0.68
DDB1-218ENST00000540784 LY6G6CO95867 125 aa10.82□□□□□ -0.68
DDB1-218ENST00000540784 CT83Q5H943 113 aa10.82□□□□□ -0.68
DDB1-218ENST00000540784 LGALS9CQ6DKI2 356 aa10.82□□□□□ -0.68
DDB1-218ENST00000540784 A0A087WWL8 130 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 LCE6AA0A183 80 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 TMEM218A2RU14 115 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 RHODO00212 210 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 CRYGDP07320 174 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 P0DMU3 169 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 FAM231AP0DMU4 169 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 FAM231CP0DMU5 169 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 GATA1P15976 413 aaPredicted RBP10.81□□□□□ -0.68
DDB1-218ENST00000540784 FAM74A4Q5TZK3 123 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
DDB1-218ENST00000540784 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms