RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 COX8AP10176 69 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 C11orf21Q9P2W6 132 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 IGKV3OR2-268A0A0C4DH90 116 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 NPIPB6E9PJ23 425 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 OVOL1O14753 267 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 RIPPLY3P57055 190 aa7.58□□□□□ -1.2
PHC1-208ENST00000540574 CHTOPQ9Y3Y2 248 aaKnown RBP7.58□□□□□ -1.2
PHC1-208ENST00000540574 IGSF10Q6WRI0 2623 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 FAM223BA6NKX1 122 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 FAM223AQ8IWN6 122 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 MEGF9Q9H1U4 602 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 DPH3P1Q9H4G8 78 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 ZFAND3Q9H8U3 227 aa7.57□□□□□ -1.2
PHC1-208ENST00000540574 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
PHC1-208ENST00000540574 A0A0U1RRA0 63 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 GAGE12BA1L429 117 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 K7ERU9 68 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 PSMB2P49721 201 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 SUMO2P61956 95 aaKnown RBP7.56□□□□□ -1.2
PHC1-208ENST00000540574 C2orf66Q6UXQ4 117 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 UBE2E2Q96LR5 201 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 ZNF815PA8K554 130 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 DEFB131AP59861 70 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
PHC1-208ENST00000540574 SCRT2Q9NQ03 307 aa7.56□□□□□ -1.2
PHC1-208ENST00000540574 MRPS12O15235 138 aaKnown RBP7.55□□□□□ -1.2
PHC1-208ENST00000540574 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
PHC1-208ENST00000540574 C10orf105Q8TEF2 133 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 NDUFA4O00483 81 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 NPC2P61916 151 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 PRR9Q5T870 116 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 USMG5Q96IX5 58 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 LINC01587Q99440 93 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 CHAC1Q9BUX1 264 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 FLNAP21333 2647 aaKnown RBP7.55□□□□□ -1.2
PHC1-208ENST00000540574 AVPP01185 164 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 HERVK_113P61574 105 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 HSD52Q0P140 79 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 LGALS9BQ3B8N2 356 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 LGALS9CQ6DKI2 356 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 SYT8Q8NBV8 401 aa7.55□□□□□ -1.2
PHC1-208ENST00000540574 ZNF418Q8TF45 676 aaPredicted RBP7.55□□□□□ -1.2
PHC1-208ENST00000540574 IGHV3-53P01767 116 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 Q8N6K4 173 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 Q8N8P6 123 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 SPOCK3Q9BQ16 436 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 IGHV7-4-1A0A0J9YVY3 117 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 HOXA3O43365 443 aaPredicted RBP7.54□□□□□ -1.2
PHC1-208ENST00000540574 PRM2P04554 102 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 SAMD5Q5TGI4 173 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 AMTNQ6UX39 209 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 PHLDA1Q8WV24 401 aaPredicted RBP7.54□□□□□ -1.2
PHC1-208ENST00000540574 MRPL16Q9NX20 251 aaKnown RBP7.54□□□□□ -1.2
PHC1-208ENST00000540574 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 CD5LO43866 347 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 TEX15Q9BXT5 2789 aa7.54□□□□□ -1.2
PHC1-208ENST00000540574 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 HIST2H2BCQ6DN03 193 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 TRAV8-2A0A0B4J237 113 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 TAX1BP3O14907 124 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 IGKV2D-26A0A0A0MRZ7 120 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 CLPSL1A2RUU4 121 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 RPL39P62891 51 aaKnown RBP7.53□□□□□ -1.2
PHC1-208ENST00000540574 SEC11AP67812 179 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 TCTEX1D4Q5JR98 221 aa7.53□□□□□ -1.2
PHC1-208ENST00000540574 IGHV3-38A0A0C4DH36 116 aa7.52□□□□□ -1.2
PHC1-208ENST00000540574 IGLC6P0CF74 106 aa7.52□□□□□ -1.2
PHC1-208ENST00000540574 EBI3Q14213 229 aa7.52□□□□□ -1.2
PHC1-208ENST00000540574 KLHL30-AS1Q8NEE0 82 aa7.52□□□□□ -1.2
PHC1-208ENST00000540574 SMPXQ9UHP9 88 aa7.52□□□□□ -1.2
PHC1-208ENST00000540574 SDHAF1A6NFY7 115 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.21
PHC1-208ENST00000540574 SLURP1P55000 103 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 OR9G4Q8NGQ1 327 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 ITPR3Q14573 2671 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 CHD6Q8TD26 2715 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 SLC25A16P16260 332 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 Q96MF0 132 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 XCL2Q9UBD3 114 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 IGHG4P01861 327 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 FXYD2P54710 66 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 DEFB125Q8N687 156 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
PHC1-208ENST00000540574 DUSP14O95147 198 aaKnown RBP7.51□□□□□ -1.21
PHC1-208ENST00000540574 Q5PR19 223 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 ADARB2-AS1A8MUL3 147 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 H7C1H1 209 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
PHC1-208ENST00000540574 APRG1Q8IVJ8 170 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms