RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 DPF1Q92782 380 aa10.71□□□□□ -0.7
INO80E-203ENST00000540562 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.7
INO80E-203ENST00000540562 PPBPP02775 128 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 SEC11AP67812 179 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 Q8N8P6 123 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 CYSLTR1Q9Y271 337 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 TGFAP01135 160 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 IGHV1-69P01742 117 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 CCL19Q99731 98 aa10.7□□□□□ -0.7
INO80E-203ENST00000540562 UCNP55089 124 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 SAMD5Q5TGI4 173 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 KLHL30-AS1Q8NEE0 82 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
INO80E-203ENST00000540562 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 KLK9Q9UKQ9 250 aa10.69□□□□□ -0.7
INO80E-203ENST00000540562 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
INO80E-203ENST00000540562 IGHV3-64A0A075B6Q5 118 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.68□□□□□ -0.7
INO80E-203ENST00000540562 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
INO80E-203ENST00000540562 IGLV2-18A0A075B6J9 118 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 IGHV3-73A0A0B4J1V6 119 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 ASIPP42127 132 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 RASL10AQ92737 203 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 NOTCH2Q04721 2471 aa10.68□□□□□ -0.7
INO80E-203ENST00000540562 CD7P09564 240 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 GTF2H5Q6ZYL4 71 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 OR9G4Q8NGQ1 327 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 PSMG3-AS1Q96PY0 264 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 H3BRM9 83 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 RAB9AP51151 201 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 SUMO2P61956 95 aaKnown RBP10.67□□□□□ -0.7
INO80E-203ENST00000540562 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
INO80E-203ENST00000540562 A0A1W2PPM0 123 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 FABP2P12104 132 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 CDKN1BP46527 198 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.7
INO80E-203ENST00000540562 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
INO80E-203ENST00000540562 PSMG4Q5JS54 123 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
INO80E-203ENST00000540562 IGHV4-59P01825 116 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
INO80E-203ENST00000540562 COX8CQ7Z4L0 72 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 DUX3Q96PT4 197 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 H3BMG7 143 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 K7EP34 96 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.7
INO80E-203ENST00000540562 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
INO80E-203ENST00000540562 TRAV21A0A0B4J279 112 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 PRB1P04280 392 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 CLEC2AQ6UVW9 174 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 PIMREGQ9BSJ6 248 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 ZNF469Q96JG9 3925 aaPredicted RBP10.64□□□□□ -0.71
INO80E-203ENST00000540562 FN1P02751 2386 aaKnown RBP10.64□□□□□ -0.71
INO80E-203ENST00000540562 K7ERU9 68 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 ATP5LO75964 103 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 SPINK13Q1W4C9 94 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
INO80E-203ENST00000540562 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
INO80E-203ENST00000540562 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
INO80E-203ENST00000540562 A0A087WX48 190 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 APOMO95445 188 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 FAM159AQ6UWV7 190 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 OR11H2Q8NH07 326 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 TEX48A0A1B0GUV7 120 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 PRSS29PA6NIE9 313 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 KHDC1LQ5JSQ8 128 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 DPH3P1Q9H4G8 78 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 TP53TG1Q9Y2A0 90 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 U3KQE9 123 aa10.62□□□□□ -0.71
INO80E-203ENST00000540562 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 SLC25A16P16260 332 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 WFDC2Q14508 124 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 CEND1Q8N111 149 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 ZNF56Q15929 161 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 HLA-DRB4P13762 266 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.71
INO80E-203ENST00000540562 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
INO80E-203ENST00000540562 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 HLA-DRB4X5D2U9 266 aa10.61□□□□□ -0.71
INO80E-203ENST00000540562 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms