RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
COPS7A-211ENST00000540408 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 SGK494Q96LW2 274 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 C9orf85Q96MD7 179 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 SMIM3Q9BZL3 60 aa8.24□□□□□ -1.09
COPS7A-211ENST00000540408 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
COPS7A-211ENST00000540408 OXTP01178 125 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 S100A4P26447 101 aaKnown RBP8.23□□□□□ -1.09
COPS7A-211ENST00000540408 RPL12P30050 165 aaKnown RBP8.23□□□□□ -1.09
COPS7A-211ENST00000540408 SMUG1Q53HV7 270 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 ZFP2Q6ZN57 461 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 C5orf17Q8NAS9 161 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 NDUFA13Q9P0J0 144 aa8.23□□□□□ -1.09
COPS7A-211ENST00000540408 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
COPS7A-211ENST00000540408 TCRAP04437 139 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
COPS7A-211ENST00000540408 LGALSLQ3ZCW2 172 aaPredicted RBP8.22□□□□□ -1.09
COPS7A-211ENST00000540408 PIK3CD-AS1Q5SR53 167 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 SAPCD1Q5SSQ6 148 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 Q8N3U1 123 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 OR2T35Q8NGX2 323 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 PSG8Q9UQ74 426 aa8.22□□□□□ -1.09
COPS7A-211ENST00000540408 MPC2O95563 127 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
COPS7A-211ENST00000540408 RAB2AP61019 212 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 FLI1Q01543 452 aaPredicted RBP8.21□□□□□ -1.1
COPS7A-211ENST00000540408 ELOBQ15370 118 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 PRNTQ86SH4 94 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 TMEM75Q8N9X5 138 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 PARLQ9H300 379 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
COPS7A-211ENST00000540408 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 INMT-MINDY4F8WBC2 141 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 SSNA1O43805 119 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 ARL14EPLP0DKL9 152 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 H2BFSP57053 126 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 SUMO1P63165 101 aaKnown RBP8.2□□□□□ -1.1
COPS7A-211ENST00000540408 S100ZQ8WXG8 99 aa8.2□□□□□ -1.1
COPS7A-211ENST00000540408 A0A087WX48 190 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 ASIPP42127 132 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 CDC34P49427 236 aaPredicted RBP8.19□□□□□ -1.1
COPS7A-211ENST00000540408 LINC00299Q6ZSB3 139 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 KLK12Q9UKR0 248 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 EPDR1Q9UM22 224 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
COPS7A-211ENST00000540408 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 RHODO00212 210 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 LINC00694P0DN24 101 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 Q0VG73 95 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 NIT1Q86X76 327 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 SAMD10Q9BYL1 202 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
COPS7A-211ENST00000540408 IGLV2-11P01706 119 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 IGLV2-8P01709 118 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 MBP02144 154 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 GCHFRP30047 84 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
COPS7A-211ENST00000540408 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 IL36BQ9NZH7 164 aa8.17□□□□□ -1.1
COPS7A-211ENST00000540408 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
COPS7A-211ENST00000540408 CXorf1O96002 111 aa8.16□□□□□ -1.1
COPS7A-211ENST00000540408 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
COPS7A-211ENST00000540408 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
COPS7A-211ENST00000540408 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
COPS7A-211ENST00000540408 B4DEV8 164 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 TMEM262E9PQX1 116 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 UPK1BO75841 260 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 FAM74A4Q5TZK3 123 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 DMRTA1Q5VZB9 504 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 OR11H4Q8NGC9 324 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 MARVELD1Q9BSK0 173 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 JPT2Q9H910 190 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 Q9UF83 564 aa8.15□□□□□ -1.1
COPS7A-211ENST00000540408 IFNA7P01567 189 aa8.14□□□□□ -1.11
COPS7A-211ENST00000540408 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
COPS7A-211ENST00000540408 RPL37AP61513 92 aaKnown RBP8.14□□□□□ -1.11
COPS7A-211ENST00000540408 RPL36AP83881 106 aaKnown RBP8.14□□□□□ -1.11
COPS7A-211ENST00000540408 SERF2P84101 59 aa8.14□□□□□ -1.11
COPS7A-211ENST00000540408 HSD17B11Q8NBQ5 300 aa8.14□□□□□ -1.11
COPS7A-211ENST00000540408 RPL36ALQ969Q0 106 aaKnown RBP8.14□□□□□ -1.11
COPS7A-211ENST00000540408 PSMG3Q9BT73 122 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms