RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 GPHB5Q86YW7 130 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 EXOC3-AS1Q8N2X6 119 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 PGLYRP4Q96LB8 373 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 UBE2E2Q96LR5 201 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 LINC00479Q96M42 142 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 ZNF747Q9BV97 191 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 RPH3ALQ9UNE2 315 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 VWFP04275 2813 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 K7EMT4 169 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 FABP2P12104 132 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 Q86TA4 180 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 BOD1L2Q8IYS8 172 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 TMEM75Q8N9X5 138 aa6.72□□□□□ -1.33
DDB1-213ENST00000539332 A0A1B0GUT8 65 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 J3QR89 54 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 WIPF1O43516 503 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 SAMD5Q5TGI4 173 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 LINC00173Q6ZV60 143 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 ERASQ7Z444 233 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.34
DDB1-213ENST00000539332 GTSF1Q8WW33 167 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.34
DDB1-213ENST00000539332 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 AAMDCQ9H7C9 122 aa6.71□□□□□ -1.34
DDB1-213ENST00000539332 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
DDB1-213ENST00000539332 ZNF207O43670 478 aaKnown RBP6.7□□□□□ -1.34
DDB1-213ENST00000539332 FGF6P10767 208 aa6.7□□□□□ -1.34
DDB1-213ENST00000539332 KIR3DS1Q14943 382 aa6.7□□□□□ -1.34
DDB1-213ENST00000539332 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
DDB1-213ENST00000539332 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
DDB1-213ENST00000539332 DAZ1Q9NQZ3 744 aaKnown RBP6.7□□□□□ -1.34
DDB1-213ENST00000539332 IGHV7-4-1A0A0J9YVY3 117 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 TMEM189A5PLL7 270 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 FBLL1A6NHQ2 334 aaKnown RBP6.69□□□□□ -1.34
DDB1-213ENST00000539332 M0R3E3 92 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 LGALS9O00182 355 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 CD28P10747 220 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 C18orf65Q6ZTR6 163 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 GOLT1AQ6ZVE7 132 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 COX8CQ7Z4L0 72 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 A0A1B0GV72 72 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 H3BUT2 72 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 SOCS3O14543 225 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 GHRHP01286 108 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 RIPPLY3P57055 190 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 C4orf3Q8WVX3 66 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 SMPXQ9UHP9 88 aa6.69□□□□□ -1.34
DDB1-213ENST00000539332 NOTCH3Q9UM47 2321 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 IGHV3OR16-13A0A075B7E8 117 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 IGHV3-49A0A0A0MS15 119 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 TRAV8-1A0A0A6YYK1 113 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 IGHV3-74A0A0B4J1X5 117 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 IGHV3-66A0A0C4DH42 116 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 RBAKDNA6NC62 111 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 ZNF785A8K8V0 405 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 DEFB136Q30KP8 78 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 ZNF493Q6ZR52 646 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 C8orf86Q6ZUL3 223 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 KLHL30-AS1Q8NEE0 82 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 UFC1Q9Y3C8 167 aa6.68□□□□□ -1.34
DDB1-213ENST00000539332 IGHV4OR15-8A0A075B7B6 117 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 A0A087WW49 117 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 TMEM213A2RRL7 107 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 SMIM13P0DJ93 91 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 HLA-DRB4P13762 266 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 HLA-DMBP28068 263 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 KRTAP10-3P60369 221 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 ADAMTSL5Q6ZMM2 481 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 SIGMAR1Q99720 223 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 TP73-AS1Q9UF72 201 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 TSSC4Q9Y5U2 329 aaPredicted RBP6.67□□□□□ -1.34
DDB1-213ENST00000539332 U3KQK5 164 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 HLA-DRB4X5D2U9 266 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 HBDP02042 147 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 HOXD3P31249 432 aaPredicted RBP6.67□□□□□ -1.34
DDB1-213ENST00000539332 KRTAP24-1Q3LI83 254 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 LINC00322Q6ZN03 302 aaPredicted RBP6.67□□□□□ -1.34
DDB1-213ENST00000539332 SGK494Q96LW2 274 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
DDB1-213ENST00000539332 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
DDB1-213ENST00000539332 IGFL4Q6B9Z1 124 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 PRNTQ86SH4 94 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 OR11H1Q8NG94 326 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 PEMTQ9UBM1 199 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 SORL1Q92673 2214 aa6.66□□□□□ -1.34
DDB1-213ENST00000539332 IGKV2-40A0A087WW87 121 aaPredicted RBP6.65□□□□□ -1.34
DDB1-213ENST00000539332 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 F8W1H4 67 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms