RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 AMMECR1LQ6DCA0 310 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 SIGLEC15Q6ZMC9 328 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 TMEM136Q6ZRR5 245 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 FA2HQ7L5A8 372 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 TSKUQ8WUA8 353 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 CHCHD1Q96BP2 118 aaKnown RBP5.25□□□□□ -1.57
LMO3-220ENST00000539232 GRAMD2BQ96HH9 432 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 TMEM70Q9BUB7 260 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 NAT8BQ9UHF3 227 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 UBE2L5PA0A1B0GUS4 154 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 A0A1W2PPV4 95 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 HELTA6NFD8 242 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 C9orf118A6NHY6 69 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 H3BMM0 161 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 H3BTX0 84 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 K7EP34 96 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 SIVA1O15304 175 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 NDUFB4O95168 129 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 APCSP02743 223 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 PRM2P04554 102 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 STAG3L2P0CL84 134 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 STAG3L3P0CL85 134 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 NANOS2P60321 138 aaKnown RBP5.24□□□□□ -1.57
LMO3-220ENST00000539232 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 RNF182Q8N6D2 247 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 CSNK1G2-AS1Q8NCQ2 148 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 OR1B1Q8NGR6 318 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 OR11H2Q8NH07 326 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 C18orf32Q8TCD1 76 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 MGST2Q99735 147 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 NPCDR1Q9BY65 106 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 SLC25A22Q9H936 323 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 X6R8D5 127 aa5.24□□□□□ -1.57
LMO3-220ENST00000539232 TRAV5A0A0B4J249 113 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 IGHV4-28A0A0C4DH34 117 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 SMIM27A0A1W2PRY6 76 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 H0Y8G0 127 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 HSBP1O75506 76 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 NUDT3O95989 172 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 MPV17L2Q567V2 206 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 Q8NAQ8 132 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 C5orf17Q8NAS9 161 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 OCC1Q8TAD7 63 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 SHANK2-AS3Q9BTD1 123 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 ZNF331Q9NQX6 463 aaPredicted RBP5.23□□□□□ -1.57
LMO3-220ENST00000539232 XCL2Q9UBD3 114 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 RNF24Q9Y225 148 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 WDR83OSQ9Y284 106 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 TP53TG1Q9Y2A0 90 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 V9GYV3 84 aa5.23□□□□□ -1.57
LMO3-220ENST00000539232 TRAV34A0A0B4J273 112 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 C7orf71A4D174 169 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 FNDC10F2Z333 226 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 H3BRN7 92 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 M0R2Z0 102 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
LMO3-220ENST00000539232 SCGB2A1O75556 95 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 SRIP30626 198 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 GCSAMLQ5JQS6 135 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 MIC13Q5XKP0 118 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 FOXI2Q6ZQN5 318 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 FAM231DQ6ZW35 169 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 SPATA12Q7Z6I5 190 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 STHQ8IWL8 128 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 OR8I2Q8N0Y5 310 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 SLC25A39Q9BZJ4 359 aaPredicted RBP5.22□□□□□ -1.57
LMO3-220ENST00000539232 SCRT2Q9NQ03 307 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
LMO3-220ENST00000539232 PRAC2D3DTV9 90 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 COX8AP10176 69 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 HLA-DRB4P13762 266 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 CMC4P56277 68 aaPredicted RBP5.21□□□□□ -1.58
LMO3-220ENST00000539232 PLP1P60201 277 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 HSD52Q0P140 79 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 RAB31Q13636 194 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 AMTNQ6UX39 209 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 MRAP2Q96G30 205 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 VCX2Q9H322 139 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 TMEM167BQ9NRX6 74 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 HSPB8Q9UJY1 196 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 HIGD1AQ9Y241 93 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 HLA-DRB4X5D2U9 266 aa5.21□□□□□ -1.58
LMO3-220ENST00000539232 TRAV8-6A0A0B4J262 113 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 MUC21A0A0G2JKD1 596 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 A0A0J9YX75 114 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 MUC21A0A140T8X8 626 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 SLC17A3O00476 420 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 GNG4P50150 75 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
LMO3-220ENST00000539232 KIR3DS1Q14943 382 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 TMEM97Q5BJF2 176 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 MUC21Q5SSG8 566 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 SPATA31B1PQ5VZV4 182 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 CEMP1Q6PRD7 247 aaPredicted RBP5.2□□□□□ -1.58
LMO3-220ENST00000539232 ERASQ7Z444 233 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 BPIFA4PQ86YQ2 179 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 C1orf158Q8N1D5 194 aa5.2□□□□□ -1.58
LMO3-220ENST00000539232 NHLRC2Q8NBF2 726 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms