RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 GNRH2O43555 120 aa9.24□□□□□ -0.93
PBX3-212ENST00000538998 KCNRGQ8N5I3 272 aa9.24□□□□□ -0.93
PBX3-212ENST00000538998 RMI2Q96E14 147 aa9.24□□□□□ -0.93
PBX3-212ENST00000538998 PHYHIPLQ96FC7 376 aa9.24□□□□□ -0.93
PBX3-212ENST00000538998 FAT3Q8TDW7 4589 aa9.24□□□□□ -0.93
PBX3-212ENST00000538998 GGTLC3B5MD39 225 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 OR10J4P0C629 311 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
PBX3-212ENST00000538998 ZNF345Q14585 488 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 RPL7L1Q6DKI1 246 aaKnown RBP9.23□□□□□ -0.93
PBX3-212ENST00000538998 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 MIR17HGQ75NE6 70 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 Q8N3U1 123 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 HSD17B11Q8NBQ5 300 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 FXYD5Q96DB9 178 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 PAXXQ9BUH6 204 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
PBX3-212ENST00000538998 TYMSP04818 313 aa9.22□□□□□ -0.93
PBX3-212ENST00000538998 EIF5AP63241 154 aaKnown RBP9.22□□□□□ -0.93
PBX3-212ENST00000538998 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
PBX3-212ENST00000538998 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
PBX3-212ENST00000538998 ZNF471Q9BX82 626 aaPredicted RBP9.22□□□□□ -0.93
PBX3-212ENST00000538998 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
PBX3-212ENST00000538998 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.94
PBX3-212ENST00000538998 BCL2L11O43521 198 aa9.21□□□□□ -0.94
PBX3-212ENST00000538998 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
PBX3-212ENST00000538998 RANP62826 216 aaKnown RBP9.21□□□□□ -0.94
PBX3-212ENST00000538998 ZNF876PQ49A33 203 aa9.21□□□□□ -0.94
PBX3-212ENST00000538998 FFAR4Q5NUL3 377 aa9.21□□□□□ -0.94
PBX3-212ENST00000538998 KCNS1Q96KK3 526 aa9.21□□□□□ -0.94
PBX3-212ENST00000538998 DIRC3C9JPN6 131 aa9.2□□□□□ -0.94
PBX3-212ENST00000538998 OR7C2O60412 319 aa9.2□□□□□ -0.94
PBX3-212ENST00000538998 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
PBX3-212ENST00000538998 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
PBX3-212ENST00000538998 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
PBX3-212ENST00000538998 SEC11BP0C7V7 166 aa9.19□□□□□ -0.94
PBX3-212ENST00000538998 MT1HL1P0DM35 61 aa9.19□□□□□ -0.94
PBX3-212ENST00000538998 ATP6V0CP27449 155 aa9.19□□□□□ -0.94
PBX3-212ENST00000538998 HNRNPA3P51991 378 aaKnown RBP9.19□□□□□ -0.94
PBX3-212ENST00000538998 NKX2-5P52952 324 aaPredicted RBP9.19□□□□□ -0.94
PBX3-212ENST00000538998 DAZAP1Q96EP5 407 aaKnown RBP9.19□□□□□ -0.94
PBX3-212ENST00000538998 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 A0A087WWC5 75 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 UBE2L3P68036 154 aaKnown RBP9.18□□□□□ -0.94
PBX3-212ENST00000538998 DPPA3Q6W0C5 159 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 OR2G3Q8NGZ4 309 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 PSMG3Q9BT73 122 aaPredicted RBP9.18□□□□□ -0.94
PBX3-212ENST00000538998 CYTL1Q9NRR1 136 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 URGCP-MRPS24S4R325 110 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
PBX3-212ENST00000538998 A0A1W2PPV4 95 aa9.17□□□□□ -0.94
PBX3-212ENST00000538998 TPT1P13693 172 aaKnown RBP9.17□□□□□ -0.94
PBX3-212ENST00000538998 C9orf62Q8N4C0 152 aa9.17□□□□□ -0.94
PBX3-212ENST00000538998 F6UZH7 168 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 MBP02144 154 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 SERF2P84101 59 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 EIF5AL1Q6IS14 154 aaKnown RBP9.16□□□□□ -0.94
PBX3-212ENST00000538998 SLC51BQ86UW2 128 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 CYB561D1Q8N8Q1 229 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 OR10G9Q8NGN4 311 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 OR10G7Q8NGN6 311 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 CMTM2Q8TAZ6 248 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 RPH3ALQ9UNE2 315 aa9.16□□□□□ -0.94
PBX3-212ENST00000538998 GAGE12JA6NER3 117 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 GAGE1Q13065 139 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 GAGE4Q13068 117 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 GAGE5Q13069 117 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 GAGE13Q4V321 117 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 FAM74A1Q5RGS3 127 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 PTH2Q96A98 100 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.94
PBX3-212ENST00000538998 TAS2R45P59539 299 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 RAB2AP61019 212 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 Q6ZRU5 148 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 GOLT1AQ6ZVE7 132 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 TVP23CQ96ET8 276 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 OTORQ9NRC9 128 aa9.14□□□□□ -0.95
PBX3-212ENST00000538998 PGPA6NDG6 321 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 PGPEP1LA6NFU8 196 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 ATRAIDQ6UW56 229 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 ZFP2Q6ZN57 461 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 NIT1Q86X76 327 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 ARL6IP6Q8N6S5 226 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 ACTR3CQ9C0K3 210 aaPredicted RBP9.13□□□□□ -0.95
PBX3-212ENST00000538998 KLK12Q9UKR0 248 aa9.13□□□□□ -0.95
PBX3-212ENST00000538998 CDC34P49427 236 aaPredicted RBP9.12□□□□□ -0.95
PBX3-212ENST00000538998 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
PBX3-212ENST00000538998 ELOBQ15370 118 aa9.12□□□□□ -0.95
PBX3-212ENST00000538998 STOML3Q8TAV4 291 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms