RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 LELP1Q5T871 98 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 EIF5AL1Q6IS14 154 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 PRADC1Q9BSG0 188 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 RPH3ALQ9UNE2 315 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 F6UZH7 168 aa9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 TYMSP04818 313 aa9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 UBE2L3P68036 154 aaKnown RBP9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 ALKAL2Q6UX46 152 aa9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
SMARCA4-206ENST00000538456 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
SMARCA4-206ENST00000538456 RHOHQ15669 191 aa9.23□□□□□ -0.93
SMARCA4-206ENST00000538456 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
SMARCA4-206ENST00000538456 TRAV21A0A0B4J279 112 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 OXTP01178 125 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 SEC11BP0C7V7 166 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 ZNF876PQ49A33 203 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 CLLU1Q5K131 121 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 ATP6V0E2Q8NHE4 81 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 TMED6Q8WW62 240 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 GTSF1LQ9H1H1 148 aa9.22□□□□□ -0.93
SMARCA4-206ENST00000538456 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 ATP6V0CP27449 155 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 RAB14P61106 215 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 CFAP126Q5VTH2 177 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 HSD17B11Q8NBQ5 300 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 KCNIP2Q9NS61 270 aa9.21□□□□□ -0.94
SMARCA4-206ENST00000538456 RS1O15537 224 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 EIF3GO75821 320 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 CMTM2Q8TAZ6 248 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 SCGB1C1Q8TD33 95 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 TREM1Q9NP99 234 aa9.2□□□□□ -0.94
SMARCA4-206ENST00000538456 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 SULT1A2P50226 295 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 CIRBP-AS1Q8TBR5 109 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 TVP23CQ96ET8 276 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 KCNS1Q96KK3 526 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 SH3BGRL3Q9H299 93 aa9.19□□□□□ -0.94
SMARCA4-206ENST00000538456 PGPA6NDG6 321 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 UMAD1C9J7I0 102 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 C17orf112F2Z3M2 114 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 RAB5CP51148 216 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 KHDC3LQ587J8 217 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 OR2G3Q8NGZ4 309 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 OTORQ9NRC9 128 aa9.18□□□□□ -0.94
SMARCA4-206ENST00000538456 PKHD1L1Q86WI1 4243 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 IGLV2-8P01709 118 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 MGST1P10620 155 aaKnown RBP9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GNG5P63218 68 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 SERF2P84101 59 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GAGE1Q13065 139 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GAGE4Q13068 117 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GAGE5Q13069 117 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 ZNF506Q5JVG8 444 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 FFAR4Q5NUL3 377 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 DNAJC30Q96LL9 226 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 SGK494Q96LW2 274 aa9.17□□□□□ -0.94
SMARCA4-206ENST00000538456 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 PGPEP1LA6NFU8 196 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 CIDEAO60543 219 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 TAS2R45P59539 299 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 Q8N976 141 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 TMEM75Q8N9X5 138 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 C11orf21Q9P2W6 132 aa9.16□□□□□ -0.94
SMARCA4-206ENST00000538456 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
SMARCA4-206ENST00000538456 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
SMARCA4-206ENST00000538456 RMI2Q96E14 147 aa9.15□□□□□ -0.94
SMARCA4-206ENST00000538456 COX11Q9Y6N1 276 aa9.15□□□□□ -0.94
SMARCA4-206ENST00000538456 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 ZNF80P51504 273 aaPredicted RBP9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 Q9UF83 564 aa9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 URGCP-MRPS24S4R325 110 aa9.14□□□□□ -0.95
SMARCA4-206ENST00000538456 MBP02144 154 aa9.13□□□□□ -0.95
SMARCA4-206ENST00000538456 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
SMARCA4-206ENST00000538456 RPL37AP61513 92 aaKnown RBP9.13□□□□□ -0.95
SMARCA4-206ENST00000538456 KLK12Q9UKR0 248 aa9.13□□□□□ -0.95
SMARCA4-206ENST00000538456 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms