RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 C18orf15Q96N68 181 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 DPH3P1Q9H4G8 78 aa10.48□□□□□ -0.73
LIMK1-208ENST00000538333 G0S2P27469 103 aa10.47□□□□□ -0.73
LIMK1-208ENST00000538333 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
LIMK1-208ENST00000538333 TMEM208Q9BTX3 173 aa10.47□□□□□ -0.73
LIMK1-208ENST00000538333 A0A0J9YX75 114 aa10.46□□□□□ -0.73
LIMK1-208ENST00000538333 APCP25054 2843 aa10.46□□□□□ -0.73
LIMK1-208ENST00000538333 C14orf178Q8N769 122 aaPredicted RBP10.46□□□□□ -0.73
LIMK1-208ENST00000538333 RASL10AQ92737 203 aa10.46□□□□□ -0.73
LIMK1-208ENST00000538333 DKK2Q9UBU2 259 aa10.46□□□□□ -0.73
LIMK1-208ENST00000538333 FGF6P10767 208 aa10.46□□□□□ -0.74
LIMK1-208ENST00000538333 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.74
LIMK1-208ENST00000538333 LAGE3Q14657 143 aa10.46□□□□□ -0.74
LIMK1-208ENST00000538333 OR1N2Q8NGR9 330 aa10.46□□□□□ -0.74
LIMK1-208ENST00000538333 AGRNO00468 2067 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 ODF1Q14990 250 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 ADAMTSL5Q6ZMM2 481 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 WFDC12Q8WWY7 111 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 DUX5Q96PT3 197 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 ZMAT4Q9H898 229 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 DLEU1O43261 78 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 POM121L12Q8N7R1 296 aa10.45□□□□□ -0.74
LIMK1-208ENST00000538333 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 C7orf71A4D174 169 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 GAGE1Q13065 139 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
LIMK1-208ENST00000538333 SUMO2P61956 95 aaKnown RBP10.43□□□□□ -0.74
LIMK1-208ENST00000538333 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
LIMK1-208ENST00000538333 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
LIMK1-208ENST00000538333 NUDT3O95989 172 aa10.43□□□□□ -0.74
LIMK1-208ENST00000538333 LINC00315P59091 139 aa10.43□□□□□ -0.74
LIMK1-208ENST00000538333 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
LIMK1-208ENST00000538333 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
LIMK1-208ENST00000538333 ATP5LO75964 103 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 PRSS1P07477 247 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 SLURP1P55000 103 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 TCTEX1D4Q5JR98 221 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 SORL1Q92673 2214 aa10.42□□□□□ -0.74
LIMK1-208ENST00000538333 MGPP08493 103 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 CD7P09564 240 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 C12orf54Q6X4T0 127 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 WFDC11Q8NEX6 87 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 FOXC2Q99958 501 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 CDKN1BP46527 198 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
LIMK1-208ENST00000538333 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
LIMK1-208ENST00000538333 K7EMI3 77 aa10.4□□□□□ -0.74
LIMK1-208ENST00000538333 NPSP0C0P6 89 aa10.4□□□□□ -0.74
LIMK1-208ENST00000538333 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
LIMK1-208ENST00000538333 Q6ZVH6 145 aa10.4□□□□□ -0.74
LIMK1-208ENST00000538333 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 ORMDL2Q53FV1 153 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 C4orf3Q8WVX3 66 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 JPT2Q9H910 190 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 ITPR3Q14573 2671 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 AKAP9Q99996 3911 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 DUSP14O95147 198 aaKnown RBP10.39□□□□□ -0.75
LIMK1-208ENST00000538333 IGKCP01834 107 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 TCTAP57738 103 aa10.39□□□□□ -0.75
LIMK1-208ENST00000538333 LINC01619G3V211 115 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 PPP1R17O96001 155 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 Q8N1Y9 231 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 TOMM6Q96B49 74 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 MDFICQ9P1T7 246 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 PCP2Q8IVA1 136 aa10.38□□□□□ -0.75
LIMK1-208ENST00000538333 TLN2Q9Y4G6 2542 aa10.37□□□□□ -0.75
LIMK1-208ENST00000538333 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
LIMK1-208ENST00000538333 DPM2O94777 84 aa10.37□□□□□ -0.75
LIMK1-208ENST00000538333 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
LIMK1-208ENST00000538333 MRPL35Q9NZE8 188 aaKnown RBP10.37□□□□□ -0.75
LIMK1-208ENST00000538333 A0A087WX48 190 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 A8MTW9 85 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 SIVA1O15304 175 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 NMUP48645 174 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 Q6ZSV7 163 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 UNC79Q9P2D8 2635 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 A0A087WWL8 130 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
LIMK1-208ENST00000538333 TAX1BP3O14907 124 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms