RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TRAV12-1A0A0B4J245 112 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 IGLL1P15814 213 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 IGHV4OR15-8A0A075B7B6 117 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 A0A087WW49 117 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 TINCRA0A1B0GVN0 87 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 TRAV4A0A0B4J268 109 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
SCARB1-205ENST00000538291 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
SCARB1-205ENST00000538291 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
SCARB1-205ENST00000538291 DKK2Q9UBU2 259 aa13.09□□□□□ -0.31
SCARB1-205ENST00000538291 F8W735 103 aaPredicted RBP13.08□□□□□ -0.31
SCARB1-205ENST00000538291 CTSGP08311 255 aa13.08□□□□□ -0.31
SCARB1-205ENST00000538291 Q8N9W7 124 aa13.08□□□□□ -0.32
SCARB1-205ENST00000538291 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
SCARB1-205ENST00000538291 COX7A2LO14548 114 aa13.08□□□□□ -0.32
SCARB1-205ENST00000538291 IGLV10-54A0A075B6I4 117 aa13.08□□□□□ -0.32
SCARB1-205ENST00000538291 F8W1H4 67 aa13.08□□□□□ -0.32
SCARB1-205ENST00000538291 CLPSL1A2RUU4 121 aa13.07□□□□□ -0.32
SCARB1-205ENST00000538291 WIPF3A6NGB9 483 aa13.07□□□□□ -0.32
SCARB1-205ENST00000538291 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
SCARB1-205ENST00000538291 SHANK1Q9Y566 2161 aa13.07□□□□□ -0.32
SCARB1-205ENST00000538291 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
SCARB1-205ENST00000538291 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 K7EN84 100 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 ETDBQ3ZM63 59 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-205ENST00000538291 SPRY2O43597 315 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
SCARB1-205ENST00000538291 BDP1A6H8Y1 2624 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 IGKV1-17P01599 117 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 AMTNQ6UX39 209 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 ORMDL1Q9P0S3 153 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
SCARB1-205ENST00000538291 RNF138Q8WVD3 245 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 PCNX2A6NKB5 2137 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 K7EMT4 169 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 SIVA1O15304 175 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 TM2D2Q9BX73 214 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 ESM1Q9NQ30 184 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 TMEM89A2RUT3 159 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 NOTCH2Q04721 2471 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 DOCK9Q9BZ29 2069 aa13.05□□□□□ -0.32
SCARB1-205ENST00000538291 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
SCARB1-205ENST00000538291 RITA1Q96K30 269 aa13.04□□□□□ -0.32
SCARB1-205ENST00000538291 MRPL36Q9P0J6 103 aaKnown RBP13.04□□□□□ -0.32
SCARB1-205ENST00000538291 DOCK11Q5JSL3 2073 aa13.04□□□□□ -0.32
SCARB1-205ENST00000538291 FUSP35637 526 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■□□□ 13.4
SCARB1-205ENST00000538291 ZNF747Q9BV97 191 aa13.04□□□□□ -0.32
SCARB1-205ENST00000538291 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 K7EP34 96 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 CFC1P0CG37 223 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 GATA1P15976 413 aaPredicted RBP13.03□□□□□ -0.32
SCARB1-205ENST00000538291 KRTAP27-1Q3LI81 207 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 PLCE1Q9P212 2302 aa13.03□□□□□ -0.32
SCARB1-205ENST00000538291 RPL39LQ96EH5 51 aaKnown RBP13.03□□□□□ -0.32
SCARB1-205ENST00000538291 IL15RAQ13261 267 aa13.02□□□□□ -0.32
SCARB1-205ENST00000538291 DEFB135Q30KP9 77 aa13.02□□□□□ -0.32
SCARB1-205ENST00000538291 GPHB5Q86YW7 130 aa13.02□□□□□ -0.32
SCARB1-205ENST00000538291 C4orf3Q8WVX3 66 aa13.02□□□□□ -0.32
SCARB1-205ENST00000538291 HHLA3Q9XRX5 114 aa13.02□□□□□ -0.32
SCARB1-205ENST00000538291 A0A1W2PPM0 123 aa13.02□□□□□ -0.33
SCARB1-205ENST00000538291 ZFP36P26651 326 aaKnown RBP13.02□□□□□ -0.33
SCARB1-205ENST00000538291 IFITM1P13164 125 aa13.01□□□□□ -0.33
SCARB1-205ENST00000538291 K7ERJ3 54 aa13.01□□□□□ -0.33
SCARB1-205ENST00000538291 INSL3P51460 131 aa13.01□□□□□ -0.33
SCARB1-205ENST00000538291 NDUFA1O15239 70 aa13.01□□□□□ -0.33
SCARB1-205ENST00000538291 C12orf74Q32Q52 190 aa13.01□□□□□ -0.33
SCARB1-205ENST00000538291 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 IGHG2P01859 326 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 BAALC-AS2P0C853 105 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 ZFP2Q6ZN57 461 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 TIMM17AQ99595 171 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 ACACBO00763 2458 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 HELZP42694 1942 aaKnown RBP13□□□□□ -0.33
SCARB1-205ENST00000538291 MED13Q9UHV7 2174 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 Q8N1Y9 231 aa13□□□□□ -0.33
SCARB1-205ENST00000538291 FBXL19-AS1Q494R0 122 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-205ENST00000538291 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 Q8N7P7 452 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 COX7B2Q8TF08 81 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 SND1-IT1Q9HBX3 110 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 TRBV7-3A0A075B6L6 115 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 UBE2AP49459 152 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
SCARB1-205ENST00000538291 PLXNA2O75051 1894 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 H3BMG7 143 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 IGLV1-47P01700 117 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 WI2-2373I1.2A0A1W2PRP0 233 aa12.98□□□□□ -0.33
SCARB1-205ENST00000538291 K7EP13 123 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms