RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 K7EM74 188 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 DLX1P56177 255 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 PSMG4Q5JS54 123 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 CCL3L1P16619 93 aa8.2□□□□□ -1.1
RTN3-208ENST00000537981 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
RTN3-208ENST00000537981 PRO1854Q9UHT4 67 aa8.2□□□□□ -1.1
RTN3-208ENST00000537981 POLEQ07864 2286 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 LGALS9O00182 355 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 NDUFA7O95182 113 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 TMEM167AQ8TBQ9 72 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 CCL13Q99616 98 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 U3KQA8 63 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 CACNA1BQ00975 2339 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 CDX4O14627 284 aaPredicted RBP8.19□□□□□ -1.1
RTN3-208ENST00000537981 OXTP01178 125 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 ZNF883P0CG24 379 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.14e-7■■□□□ 11.5
RTN3-208ENST00000537981 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 KIR2DL5BQ8NHK3 375 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 TMEM14CQ9P0S9 112 aa8.19□□□□□ -1.1
RTN3-208ENST00000537981 VPREB1P12018 145 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 ERCC8Q13216 396 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 LINC01620Q4KN68 170 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 CEP295Q9C0D2 2601 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 IGHV3OR16-8A0A075B7F1 116 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 Q6ZSV7 163 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 ZNF833PQ6ZTB9 187 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
RTN3-208ENST00000537981 C11orf86A6NJI1 115 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 CECR9P0C854 216 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 OR4C13Q8NGP0 309 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 TTTY12Q9BZ98 90 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 H3BMM0 161 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 M0R2P5 195 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 SPRY3O43610 288 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 PMVKQ15126 192 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 UBE2WQ96B02 151 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
RTN3-208ENST00000537981 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
RTN3-208ENST00000537981 CRYGDP07320 174 aa8.16□□□□□ -1.1
RTN3-208ENST00000537981 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
RTN3-208ENST00000537981 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
RTN3-208ENST00000537981 TIMD4Q96H15 378 aa8.16□□□□□ -1.1
RTN3-208ENST00000537981 CHD8Q9HCK8 2581 aa8.16□□□□□ -1.1
RTN3-208ENST00000537981 H3BRN7 92 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 HES1Q14469 280 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
RTN3-208ENST00000537981 IGFBPL1Q8WX77 278 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.1
RTN3-208ENST00000537981 MRPL53Q96EL3 112 aaKnown RBP8.15□□□□□ -1.1
RTN3-208ENST00000537981 DEFB127Q9H1M4 99 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 LINC00527Q9UJ94 153 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 PRRC2AP48634 2157 aaKnown RBP8.15□□□□□ -1.1
RTN3-208ENST00000537981 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 TRAV41A0A0B4J266 112 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 EBI3Q14213 229 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 SIGLEC9Q9Y336 463 aa8.15□□□□□ -1.1
RTN3-208ENST00000537981 RPL13AP40429 203 aaKnown RBP8.14□□□□□ -1.11
RTN3-208ENST00000537981 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 DEFB124Q8NES8 71 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 GAFA1Q96PS6 74 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 AMELXQ99217 191 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 AKAP13Q12802 2813 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 IGLV4-69A0A075B6H9 119 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 H7C423 109 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 TRIAP1O43715 76 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 FOLR3P41439 243 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 Q1RN00 199 aa8.14□□□□□ -1.11
RTN3-208ENST00000537981 IGHV3-64A0A075B6Q5 118 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 J3KT08 172 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 ZNF491Q8N8L2 437 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 ZNF580Q9UK33 172 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 TSHBP01222 138 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 HERVK_113P61574 105 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 SLC25A29Q8N8R3 303 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 V9GYY9 64 aa8.13□□□□□ -1.11
RTN3-208ENST00000537981 TRBV7-7A0A0K0K1E9 115 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 I3L2K1 104 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 LHBP01229 141 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 CD59P13987 128 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 NSUN5P1Q3KNT7 163 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 HRCT1Q6UXD1 115 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 DYNAPQ8N1N2 210 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 C8orf31Q8N9H6 132 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 PCNX1Q96RV3 2341 aa8.12□□□□□ -1.11
RTN3-208ENST00000537981 J3QLI3 93 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms