RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 GAFA1Q96PS6 74 aa8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 RNF7Q9UBF6 113 aa8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 CTSZQ9UBR2 303 aa8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 RAI1Q7Z5J4 1906 aaPredicted RBP8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 FAM208BQ5VWN6 2430 aa8.75□□□□□ -1.01
SEMA4D-221ENST00000537934 TRAV8-4A0A0B4J246 113 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 RPL27AP46776 148 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 MRPL23Q16540 153 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 ZNF672Q499Z4 452 aaPredicted RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 NRACQ8N912 160 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 NEXN-AS1Q8NBZ9 246 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 UBR5O95071 2799 aaPredicted RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 A0A1W2PPR1 153 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 IGKV1-17P01599 117 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 LINC01587Q99440 93 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 PRO1854Q9UHT4 67 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 CENPEQ02224 2701 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 ORM1P02763 201 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 SLC25A16P16260 332 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 RPL13AP40429 203 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 CCL17Q92583 94 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 CCL13Q99616 98 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 SPXQ9BT56 116 aa8.74□□□□□ -1.01
SEMA4D-221ENST00000537934 IGKV2-40A0A087WW87 121 aaPredicted RBP8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 B9A039 149 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 IGKV2D-40P01614 121 aaPredicted RBP8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 APELAP0DMC3 54 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 CRIP2P52943 208 aaPredicted RBP8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 A0A0J9YY99 117 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 I3L2K1 104 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 IL17RELQ6ZVW7 336 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 ZNF843Q8N446 348 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 FAM216BQ8N7L0 139 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
SEMA4D-221ENST00000537934 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 LYNX1G3V0Z9 82 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 ZNF491Q8N8L2 437 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 TOMM6Q96B49 74 aa8.72□□□□□ -1.01
SEMA4D-221ENST00000537934 CELSR1Q9NYQ6 3014 aa8.71□□□□□ -1.01
SEMA4D-221ENST00000537934 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.01
SEMA4D-221ENST00000537934 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.01
SEMA4D-221ENST00000537934 RNF125Q96EQ8 232 aa8.71□□□□□ -1.01
SEMA4D-221ENST00000537934 SPG11Q96JI7 2443 aa8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 LY6HO94772 140 aa8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 DUSP14O95147 198 aaKnown RBP8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 KLHL30-AS1Q8NEE0 82 aa8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 Q8TAT8 98 aa8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 C21orf62Q9NYP8 219 aa8.71□□□□□ -1.02
SEMA4D-221ENST00000537934 TMEM178BH3BS89 294 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 P0DMU3 169 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TMEM155Q4W5P6 130 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 CHCHD5Q9BSY4 110 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 KMT2BQ9UMN6 2715 aaPredicted RBP8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TEX22C9J3V5 150 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TIMM23O14925 209 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TRGV3P03979 118 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 ERCC8Q13216 396 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
SEMA4D-221ENST00000537934 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 TEX49A0A1B0GTD5 131 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 LGALS9O00182 355 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 ENSAO43768 121 aaKnown RBP8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 CRYGBP07316 175 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 C8orf31Q8N9H6 132 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
SEMA4D-221ENST00000537934 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 CCL3L1P16619 93 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 TIMD4Q96H15 378 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 M0R2P5 195 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 LYPD2Q6UXB3 125 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 KLK15Q9H2R5 256 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 SIGLEC9Q9Y336 463 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
SEMA4D-221ENST00000537934 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 H3BMM0 161 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 C11orf71Q6IPW1 123 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 Q6ZS46 218 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 UBTD1Q9HAC8 227 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 TRBV10-2A0A0K0K1G8 114 aa8.67□□□□□ -1.02
SEMA4D-221ENST00000537934 HERVK_113P61574 105 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms