RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 B4DEV8 164 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 M0R036 132 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GNRH2O43555 120 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GAGE7O76087 117 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 TYMSP04818 313 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
TNFRSF1A-209ENST00000536717 IGKV3D-20A0A0C4DH25 116 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 M0R2N4 97 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 TCL1AP56279 114 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 OR5I1Q13606 314 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 Q6ZTI0 123 aa12.49□□□□□ -0.41
TNFRSF1A-209ENST00000536717 LINC01551Q86U37 167 aa12.48□□□□□ -0.41
TNFRSF1A-209ENST00000536717 MDFICQ9P1T7 246 aa12.48□□□□□ -0.41
TNFRSF1A-209ENST00000536717 NAT8Q9UHE5 227 aa12.48□□□□□ -0.41
TNFRSF1A-209ENST00000536717 IGLV2-18A0A075B6J9 118 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 K7EN84 100 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 NUDT3O95989 172 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 P01737 135 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 HOXA5P20719 270 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 PKHD1P08F94 4074 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 ASIPP42127 132 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 Q6ZR54 194 aa12.47□□□□□ -0.41
TNFRSF1A-209ENST00000536717 SPXQ9BT56 116 aa12.46□□□□□ -0.42
TNFRSF1A-209ENST00000536717 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RPL19P84098 196 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-209ENST00000536717 C18orf15Q96N68 181 aa12.45□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-209ENST00000536717 PKD1P98161 4303 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 GRIFINA4D1Z8 144 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RTL8CO15255 209 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 SPINK4O60575 86 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ADIRFQ15847 76 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 OR2D3Q8NGH3 330 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
TNFRSF1A-209ENST00000536717 TRGV1A0A0A0MS02 117 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 A0A0J9YY99 117 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 XKRY2A2RUG3 117 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 CXCL1P09341 107 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 FAM3BP58499 235 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 LINC00336Q6ZUF6 198 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
TNFRSF1A-209ENST00000536717 TRGV2A0A075B6R0 118 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 TMEM218A2RU14 115 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 H3BVH4 76 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 M0R2P5 195 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 RPP21Q9H633 154 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 LINC00588Q9Y4M8 146 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ZNRF2Q8NHG8 242 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
TNFRSF1A-209ENST00000536717 DYNC1H1Q14204 4646 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 F8W036 122 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 CCL18P55774 89 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 ZNF575Q86XF7 245 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 OSTCQ9NRP0 149 aa12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
TNFRSF1A-209ENST00000536717 H3BNG1 76 aa12.4□□□□□ -0.42
TNFRSF1A-209ENST00000536717 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
TNFRSF1A-209ENST00000536717 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF1A-209ENST00000536717 VSIG2Q96IQ7 327 aa12.4□□□□□ -0.42
TNFRSF1A-209ENST00000536717 A0A1B0GVY2 172 aa12.39□□□□□ -0.43
TNFRSF1A-209ENST00000536717 RASL10AQ92737 203 aa12.39□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
TNFRSF1A-209ENST00000536717 PHLDA3Q9Y5J5 127 aa12.39□□□□□ -0.43
TNFRSF1A-209ENST00000536717 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
TNFRSF1A-209ENST00000536717 GZMBP10144 247 aa12.38□□□□□ -0.43
TNFRSF1A-209ENST00000536717 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SEC11CQ9BY50 192 aa12.38□□□□□ -0.43
TNFRSF1A-209ENST00000536717 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 A8MWL6 223 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 OR5AL1P0C617 328 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 ADCYAP1P18509 176 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 CT83Q5H943 113 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 FER1L6-AS1Q8NA97 138 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 SYT8Q8NBV8 401 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 OR10G8Q8NGN5 311 aa12.37□□□□□ -0.43
TNFRSF1A-209ENST00000536717 PTH2Q96A98 100 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms