RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SCGB3A1Q96QR1 104 aa12.07□□□□□ -0.48
CHMP1A-202ENST00000535997 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
CHMP1A-202ENST00000535997 SPRY2O43597 315 aa12.07□□□□□ -0.48
CHMP1A-202ENST00000535997 POM121L12Q8N7R1 296 aa12.07□□□□□ -0.48
CHMP1A-202ENST00000535997 SPOCK3Q9BQ16 436 aa12.07□□□□□ -0.48
CHMP1A-202ENST00000535997 KLLNB2CW77 178 aa12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 NXPH4O95158 308 aa12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 GATA3P23771 443 aa12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 FXYD2P54710 66 aa12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
CHMP1A-202ENST00000535997 TAL2Q16559 108 aa12.05□□□□□ -0.48
CHMP1A-202ENST00000535997 CEND1Q8N111 149 aa12.05□□□□□ -0.48
CHMP1A-202ENST00000535997 PKD1L2Q7Z442 2459 aa12.05□□□□□ -0.48
CHMP1A-202ENST00000535997 K7ERU9 68 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 AVPP01185 164 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 MGPP08493 103 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 DCANP1Q8TF63 244 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 NAA38Q9BRA0 125 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 CHTOPQ9Y3Y2 248 aaKnown RBP12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 A0A087WW49 117 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 FABP2P12104 132 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 RNF151Q2KHN1 245 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 FAM159AQ6UWV7 190 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 CSPG4Q6UVK1 2322 aa12.04□□□□□ -0.48
CHMP1A-202ENST00000535997 SRD5A1P18405 259 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 PSMB8P28062 276 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 KIF25-AS1Q9Y6Z4 181 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 MUC4Q99102 2169 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 DSCR9P59020 149 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 SPCS1Q9Y6A9 102 aa12.03□□□□□ -0.48
CHMP1A-202ENST00000535997 CELSR2Q9HCU4 2923 aa12.02□□□□□ -0.48
CHMP1A-202ENST00000535997 LINC00315P59091 139 aa12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 RPL32P62910 135 aaKnown RBP12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 CSTL1Q9H114 145 aa12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 LINC01549A6NIU2 74 aa12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
CHMP1A-202ENST00000535997 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
CHMP1A-202ENST00000535997 BAALCQ8WXS3 180 aa12.01□□□□□ -0.49
CHMP1A-202ENST00000535997 TMEM89A2RUT3 159 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 OR11H12B2RN74 326 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 EDN2P20800 178 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 OR11H1Q8NG94 326 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 OR11H2Q8NH07 326 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
CHMP1A-202ENST00000535997 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 LINC01619G3V211 115 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 VPS25Q9BRG1 176 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 NHP2Q9NX24 153 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 FLNCQ14315 2725 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 AGRNO00468 2067 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
CHMP1A-202ENST00000535997 IGHV4-59P01825 116 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 CD7P09564 240 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 COTL1Q14019 142 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 TRAV12-3A0A0B4J271 114 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 VCYO14598 125 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 HIST1H4GQ99525 98 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 CYSLTR1Q9Y271 337 aa11.98□□□□□ -0.49
CHMP1A-202ENST00000535997 E9PLD3 99 aa11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 SNRPD3P62318 126 aaKnown RBP11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 DEFB112Q30KQ8 113 aa11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 K7ERJ3 54 aa11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 NEGR1Q7Z3B1 354 aa11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 LINC01356Q8N9X3 169 aa11.97□□□□□ -0.49
CHMP1A-202ENST00000535997 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.49
CHMP1A-202ENST00000535997 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.49
CHMP1A-202ENST00000535997 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
CHMP1A-202ENST00000535997 A0A0J9YX75 114 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 JPT2Q9H910 190 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 DUSP14O95147 198 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 ZNF688P0C7X2 276 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 PAPPA-AS1Q5QFB9 102 aa11.95□□□□□ -0.5
CHMP1A-202ENST00000535997 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 IGLL5B9A064 214 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 F5H697 171 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 J3QLI3 93 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 SAP30O75446 220 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 CRYGDP07320 174 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 C9orf85Q96MD7 179 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 PIEZO1Q92508 2521 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 CRYBG3Q68DQ2 2970 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
CHMP1A-202ENST00000535997 K7EQG2 157 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms