RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 NDUFA7O95182 113 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 GDF5OSQ5U4N7 250 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 ZNF418Q8TF45 676 aaPredicted RBP6.03□□□□□ -1.44
COL21A1-212ENST00000535941 CHCHD1Q96BP2 118 aaKnown RBP6.03□□□□□ -1.44
COL21A1-212ENST00000535941 PRR25Q96S07 402 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 SPAG8Q99932 426 aaPredicted RBP6.03□□□□□ -1.44
COL21A1-212ENST00000535941 NDFIP1Q9BT67 221 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 RPP21Q9H633 154 aaKnown RBP6.03□□□□□ -1.44
COL21A1-212ENST00000535941 LENEPQ9Y5L5 61 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 HIGD1CA8MV81 97 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 H3BTX0 84 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 NMUP48645 174 aa6.03□□□□□ -1.44
COL21A1-212ENST00000535941 TRAV8-1A0A0A6YYK1 113 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 TRAV2A0A0B4J234 112 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 M0R3E3 92 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 ZNF138P52744 262 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 GOLT1AQ6ZVE7 132 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 DAZ1Q9NQZ3 744 aaKnown RBP6.02□□□□□ -1.45
COL21A1-212ENST00000535941 SPANXB1Q9NS25 103 aaPredicted RBP6.02□□□□□ -1.45
COL21A1-212ENST00000535941 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 ITPR2Q14571 2701 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 EDN2P20800 178 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 HLA-DMBP28068 263 aa6.02□□□□□ -1.45
COL21A1-212ENST00000535941 F8W1H4 67 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 IGLC6P0CF74 106 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 HILS1P60008 231 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 LINC01559Q495D7 138 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 ZNF493Q6ZR52 646 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 OR8A1Q8NGG7 326 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 OR9G4Q8NGQ1 327 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 C8orf49Q96NF6 230 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 HAX1O00165 279 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 ZNF80P51504 273 aaPredicted RBP6.01□□□□□ -1.45
COL21A1-212ENST00000535941 FOXI2Q6ZQN5 318 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 LCNL1Q6ZST4 164 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 ODF3Q96PU9 254 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 C1QTNF4Q9BXJ3 329 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 ANK2Q01484 3957 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 HELZ2Q9BYK8 2649 aaKnown RBP6.01□□□□□ -1.45
COL21A1-212ENST00000535941 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 ADARB2-AS1A8MUL3 147 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 HBBP68871 147 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 URB1-AS1Q96HZ7 61 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
COL21A1-212ENST00000535941 IGHV4OR15-8A0A075B7B6 117 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 A0A087WW49 117 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 CSN1S1P47710 185 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 SIGLEC8Q9NYZ4 499 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 TRBV20-1A0A075B6N2 111 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 A8MWL6 223 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 H3BMG7 143 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 K7ERJ3 54 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 INSL3P51460 131 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 LINC01545Q5VT33 79 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 SYT8Q8NBV8 401 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 IGKV2-40A0A087WW87 121 aaPredicted RBP6□□□□□ -1.45
COL21A1-212ENST00000535941 APOMO95445 188 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 IGKV2D-40P01614 121 aaPredicted RBP6□□□□□ -1.45
COL21A1-212ENST00000535941 GAGE13Q4V321 117 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 IL17RELQ6ZVW7 336 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 C20orf78Q9BR46 151 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 AP5S1Q9NUS5 200 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
COL21A1-212ENST00000535941 ERG28Q9UKR5 140 aa6□□□□□ -1.45
COL21A1-212ENST00000535941 IGHV4-4A0A075B6R2 117 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 Q6AWC8 147 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 U3KQK5 164 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
COL21A1-212ENST00000535941 RNF182Q8N6D2 247 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 ZFAND2AQ8N6M9 145 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 PRSS3P2Q8NHM4 247 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 AGPAT4-IT1Q9H0P7 198 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 DOPEY2Q9Y3R5 2298 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 PTPN13Q12923 2485 aa5.99□□□□□ -1.45
COL21A1-212ENST00000535941 LINC01546A6NGU7 62 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 KLLNB2CW77 178 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 K7EQG2 157 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 SH2D1AO60880 128 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 IGHV3-11P01762 117 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 C18orf65Q6ZTR6 163 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 PRNTQ86SH4 94 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 IGHV3OR16-8A0A075B7F1 116 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 IGHV3-35A0A0C4DH35 117 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 CT45A10P0DMU9 189 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 PRR9Q5T870 116 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 AMTNQ6UX39 209 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 RHPN1-AS1Q9BWJ2 59 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 POLQO75417 2590 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
COL21A1-212ENST00000535941 FGF6P10767 208 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 HOXD3P31249 432 aaPredicted RBP5.98□□□□□ -1.45
COL21A1-212ENST00000535941 RBPMS2Q6ZRY4 209 aaKnown RBP5.98□□□□□ -1.45
COL21A1-212ENST00000535941 C11orf21Q9P2W6 132 aa5.98□□□□□ -1.45
COL21A1-212ENST00000535941 FLNAP21333 2647 aaKnown RBP5.97□□□□□ -1.45
COL21A1-212ENST00000535941 OVOL1O14753 267 aa5.97□□□□□ -1.45
COL21A1-212ENST00000535941 PCP2Q8IVA1 136 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms