RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 MUC21A0A0G2JKD1 596 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 MUC21A0A140T8X8 626 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 LOC389332A0A1B0GUA5 103 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 CBY3A6NI87 242 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 OVOL1O14753 267 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 TRBV12-3P01733 135 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 ORM1P02763 201 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 TRGV3P03979 118 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 IGHV4-38-2P0DP08 117 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 MUC21Q5SSG8 566 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 UNQ9165/PRO28630Q6UXU0 137 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 ADAMTSL5Q6ZMM2 481 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 Q6ZQT7 251 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 OR9G4Q8NGQ1 327 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 OR2K2Q8NGT1 345 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 LINC00477Q96M19 166 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 HHLA3Q9XRX5 114 aa4.42□□□□□ -1.7
TNFRSF1A-206ENST00000535038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.41□□□□□ -1.72e-6■■■■□ 19.7
TNFRSF1A-206ENST00000535038 EVI2AP22794 236 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 MT3P25713 68 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 ARL3P36405 182 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 LINC00315P59091 139 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 SEC11AP67812 179 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 TMEM78Q5T7P6 136 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 TMEM219Q86XT9 240 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 OR8A1Q8NGG7 326 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 MRAP2Q96G30 205 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 HIGD1BQ9P298 99 aa4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 SPTAN1Q13813 2472 aaKnown RBP4.41□□□□□ -1.7
TNFRSF1A-206ENST00000535038 CSMD1Q96PZ7 3565 aa4.4□□□□□ -1.7
TNFRSF1A-206ENST00000535038 PIEZO1Q92508 2521 aa4.4□□□□□ -1.7
TNFRSF1A-206ENST00000535038 IGHV3OR16-13A0A075B7E8 117 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV4-30-2A0A087WSY4 118 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV3-49A0A0A0MS15 119 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRAV40A0A0B4J280 105 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TMEM89A2RUT3 159 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 K7EMT4 169 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 M0R381 172 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ZNF207O43670 478 aaKnown RBP4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LEPP41159 167 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 FXYD7P58549 80 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RPL32P62910 135 aaKnown RBP4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 HSD52Q0P140 79 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 BRD3OSQ6XYD6 125 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RNF152Q8N8N0 203 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 OR4X2Q8NGF9 303 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TMEM158Q8WZ71 300 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SMPXQ9UHP9 88 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 KIF25-AS1Q9Y6Z4 181 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MUC4Q99102 2169 aa4.4□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CFAP46Q8IYW2 2715 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV3OR16-10A0A075B7F0 116 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGKV2D-26A0A0A0MRZ7 120 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRAV12-1A0A0B4J245 112 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRAV21A0A0B4J279 112 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 KLLNB2CW77 178 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 H3BRM9 83 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 H3BUX3 64 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 K7EMI3 77 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ATP5LO75964 103 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MSMBP08118 114 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SLC25A16P16260 332 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 BLCAPP62952 87 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 UFSP1Q6NVU6 142 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PCP2Q8IVA1 136 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MYOZ3Q8TDC0 251 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RASL10AQ92737 203 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ODF3Q96PU9 254 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CCL19Q99731 98 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SMIM2Q9BVW6 85 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LINC00527Q9UJ94 153 aa4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 USP9XQ93008 2570 aaPredicted RBP4.39□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV4OR15-8A0A075B7B6 117 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A0A087WW49 117 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CYSRT1A8MQ03 144 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LINC01619G3V211 115 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 H0Y8G0 127 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 H3BVH4 76 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RNASE3P12724 160 aaKnown RBP4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PSMB8P28062 276 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RBX1P62877 108 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LAGE3Q14657 143 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ANXA2RQ3ZCQ2 193 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SAMD13Q5VXD3 122 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CLEC2AQ6UVW9 174 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RNASE8Q8TDE3 154 aaKnown RBP4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DCANP1Q8TF63 244 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SVEP1Q4LDE5 3571 aa4.38□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A0A087WX48 190 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms