RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SMDT1Q9H4I9 107 aa17■□□□□ 0.31
SIPA1-210ENST00000534406 TRAV4A0A0B4J268 109 aa16.99■□□□□ 0.31
SIPA1-210ENST00000534406 P01737 135 aa16.99■□□□□ 0.31
SIPA1-210ENST00000534406 ARMS2P0C7Q2 107 aa16.99■□□□□ 0.31
SIPA1-210ENST00000534406 CLLU1Q5K131 121 aa16.99■□□□□ 0.31
SIPA1-210ENST00000534406 OCC1Q8TAD7 63 aa16.99■□□□□ 0.31
SIPA1-210ENST00000534406 LCE6AA0A183 80 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 ZNF727A8MUV8 499 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 K7EN84 100 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 MED14OSP0DP75 135 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 ZNF575Q86XF7 245 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 C15orf53Q8NAA6 179 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 OR2D3Q8NGH3 330 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 LY96Q9Y6Y9 160 aa16.98■□□□□ 0.31
SIPA1-210ENST00000534406 SFTA3P0C7M3 94 aa16.97■□□□□ 0.31
SIPA1-210ENST00000534406 SRSF3P84103 164 aaKnown RBP16.97■□□□□ 0.31
SIPA1-210ENST00000534406 OR4C5Q8NGB2 326 aa16.97■□□□□ 0.31
SIPA1-210ENST00000534406 SCRT2Q9NQ03 307 aa16.97■□□□□ 0.31
SIPA1-210ENST00000534406 LYSTQ99698 3801 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 TRAV26-1A0A087WT03 109 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 C9JQL5 133 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 RPS20P60866 119 aaKnown RBP16.96■□□□□ 0.31
SIPA1-210ENST00000534406 PIK3CD-AS1Q5SR53 167 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 SYT8Q8NBV8 401 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 LINC00476Q8WZB0 136 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 ZNF479Q96JC4 524 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 PHLDA3Q9Y5J5 127 aa16.96■□□□□ 0.31
SIPA1-210ENST00000534406 NACAE9PAV3 2078 aa16.95■□□□□ 0.3
SIPA1-210ENST00000534406 FAM74A3Q4VXF1 159 aa16.95■□□□□ 0.3
SIPA1-210ENST00000534406 POM121L12Q8N7R1 296 aa16.95■□□□□ 0.3
SIPA1-210ENST00000534406 VPS13DQ5THJ4 4388 aa16.94■□□□□ 0.3
SIPA1-210ENST00000534406 TRGV4A0A0C4DH28 118 aa16.94■□□□□ 0.3
SIPA1-210ENST00000534406 A0A0J9YY99 117 aa16.94■□□□□ 0.3
SIPA1-210ENST00000534406 XKRY2A2RUG3 117 aa16.94■□□□□ 0.3
SIPA1-210ENST00000534406 RS1O15537 224 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 SLAQ13239 276 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 LINC01551Q86U37 167 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 ZFP82Q8N141 532 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 NUDT10Q8NFP7 164 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 NUDT11Q96G61 164 aa16.93■□□□□ 0.3
SIPA1-210ENST00000534406 RNASE7Q9H1E1 156 aaKnown RBP16.93■□□□□ 0.3
SIPA1-210ENST00000534406 A8MWV9 139 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 SNAI2O43623 268 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 NUDT3O95989 172 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 FHL2Q14192 279 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 CFAP126Q5VTH2 177 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 LGALS9CQ6DKI2 356 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 RPP21Q9H633 154 aaKnown RBP16.92■□□□□ 0.3
SIPA1-210ENST00000534406 PRO0255Q9UI72 69 aa16.92■□□□□ 0.3
SIPA1-210ENST00000534406 H3BNG1 76 aa16.91■□□□□ 0.3
SIPA1-210ENST00000534406 M0R381 172 aa16.91■□□□□ 0.3
SIPA1-210ENST00000534406 LY6G6CO95867 125 aa16.91■□□□□ 0.3
SIPA1-210ENST00000534406 OR5AL1P0C617 328 aa16.91■□□□□ 0.3
SIPA1-210ENST00000534406 PAX4O43316 350 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 CIDEAO60543 219 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 GZMBP10144 247 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 DMRTA1Q5VZB9 504 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 VSIG2Q96IQ7 327 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 HHLA3Q9XRX5 114 aa16.9■□□□□ 0.3
SIPA1-210ENST00000534406 NXPH4O95158 308 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 CRYBA4P53673 196 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 TMEM241Q24JQ0 296 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 SOHLH1Q5JUK2 328 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 FAM231DQ6ZW35 169 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 FER1L6-AS1Q8NA97 138 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 OR10AG1Q8NH19 301 aa16.89■□□□□ 0.29
SIPA1-210ENST00000534406 SSBP4Q9BWG4 385 aaPredicted RBP16.89■□□□□ 0.29
SIPA1-210ENST00000534406 IGLC6P0CF74 106 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 P0DMU3 169 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 FAM231AP0DMU4 169 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 FAM231CP0DMU5 169 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 TPPP3Q9BW30 176 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 NAT8Q9UHE5 227 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 RYR2Q92736 4967 aa16.88■□□□□ 0.29
SIPA1-210ENST00000534406 GATCO43716 136 aaKnown RBP16.87■□□□□ 0.29
SIPA1-210ENST00000534406 ERVFC1-1P60608 527 aa16.87■□□□□ 0.29
SIPA1-210ENST00000534406 SPANXN1Q5VSR9 72 aa16.87■□□□□ 0.29
SIPA1-210ENST00000534406 RHODO00212 210 aa16.86■□□□□ 0.29
SIPA1-210ENST00000534406 GATA1P15976 413 aaPredicted RBP16.86■□□□□ 0.29
SIPA1-210ENST00000534406 ZFP2Q6ZN57 461 aa16.86■□□□□ 0.29
SIPA1-210ENST00000534406 SFRP2Q96HF1 295 aa16.86■□□□□ 0.29
SIPA1-210ENST00000534406 JPT2Q9H910 190 aa16.86■□□□□ 0.29
SIPA1-210ENST00000534406 IGHV3-73A0A0B4J1V6 119 aa16.85■□□□□ 0.29
SIPA1-210ENST00000534406 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
SIPA1-210ENST00000534406 RPL23P62829 140 aaKnown RBP16.85■□□□□ 0.29
SIPA1-210ENST00000534406 ADIRFQ15847 76 aa16.85■□□□□ 0.29
SIPA1-210ENST00000534406 ICOSQ9Y6W8 199 aa16.85■□□□□ 0.29
SIPA1-210ENST00000534406 MUC21A0A0G2JKD1 596 aa16.84■□□□□ 0.29
SIPA1-210ENST00000534406 MUC21A0A140T8X8 626 aa16.84■□□□□ 0.29
SIPA1-210ENST00000534406 UBE2DNLQ8IWF7 75 aa16.84■□□□□ 0.29
SIPA1-210ENST00000534406 F2Z2F3 143 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 CTRLP40313 264 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 CT83Q5H943 113 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 FAM74A4Q5TZK3 123 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 C15orf54Q8N8G6 183 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 ISOC2Q96AB3 205 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 SAMD10Q9BYL1 202 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 OSTCQ9NRP0 149 aa16.83■□□□□ 0.28
SIPA1-210ENST00000534406 A0A096LPF7 62 aa16.82■□□□□ 0.28
SIPA1-210ENST00000534406 CACNG7P62955 275 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms