RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 FAM78BQ5VT40 261 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 KCNIP4Q6PIL6 250 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF600Q6ZNG1 722 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF818PQ6ZRF7 136 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 LHFPL1Q86WI0 220 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SELENOHQ8IZQ5 122 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 FAM89BQ8N5H3 189 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM252Q8N6L7 170 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 OR1P1Q8NH06 330 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 OR4S2Q8NH73 311 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 PINX1Q96BK5 328 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 UPK3BQ9BT76 320 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 RBKSQ9H477 322 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 DNAJC4Q9NNZ3 241 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 NOP10Q9NPE3 64 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 LYRM2Q9NU23 88 aaPredicted RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC39A9Q9NUM3 307 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 BET1LQ9NYM9 111 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 DOK5Q9P104 306 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 CACNG5Q9UF02 275 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 ANAPC10Q9UM13 185 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 FUT9Q9Y231 359 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 WDR83OSQ9Y284 106 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 MRPS16Q9Y3D3 137 aaKnown RBP1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 GOLT1BQ9Y3E0 138 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 OR51B2Q9Y5P1 312 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 HLA-DRB4X5D2U9 266 aa1.96□□□□□ -2.1
CHMP4A-208ENST00000534106 TRAV12-2A0A075B6T6 113 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 IGLV9-49A0A0B4J1Y8 123 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TEX48A0A1B0GUV7 120 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 A4D1N5 150 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 C17orf112F2Z3M2 114 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 M0R2Z0 102 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TCAPO15273 167 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SIVA1O15304 175 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 CRXO43186 299 aaPredicted RBP1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SYNGR2O43760 224 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SPINK4O60575 86 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 CDS2O95674 445 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 HRASP01112 189 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 PMCHP20382 165 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 DDTP30046 118 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 G6PCP35575 357 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 GPX4P36969 197 aaPredicted RBP1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 PAX9P55771 341 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TAS2R30P59541 319 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 ERVK-16P61578 105 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF415Q09FC8 603 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 ELOBQ15370 118 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SCXQ7RTU7 201 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST3H2BBQ8N257 126 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC24A4Q8NFF2 622 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 OR4D5Q8NGN0 318 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10G4Q8NGN3 311 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10G9Q8NGN4 311 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10G7Q8NGN6 311 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 OR1L8Q8NGR8 309 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM37Q8WXS4 190 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 IL22RA2Q969J5 263 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 GPR146Q96CH1 333 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 VSIG2Q96IQ7 327 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 METTL26Q96S19 204 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM208Q9BTX3 173 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 SAMD10Q9BYL1 202 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 ACTR3CQ9C0K3 210 aaPredicted RBP1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM222Q9H0R3 208 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 ENY2Q9NPA8 101 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 NAT8Q9UHE5 227 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 VAX2Q9UIW0 290 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 RPH3ALQ9UNE2 315 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TIMM8BQ9Y5J9 83 aaPredicted RBP1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 TRAPPC1Q9Y5R8 145 aa1.95□□□□□ -2.1
CHMP4A-208ENST00000534106 A0A0G2JRQ6 117 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CTXND1A0A1B0GTU2 59 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 DUXBA0A1W2PPF3 345 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 A0A1W2PPV4 95 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 GRIFINA4D1Z8 144 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 LYRM9A8MSI8 78 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 B4DEV8 164 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 LECT2O14960 151 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BKO60814 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 PGLYRP1O75594 196 aaPredicted RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HPRT1P00492 218 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 KRASP01116 189 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 IGKV1-17P01599 117 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 MBP02144 154 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BJP06899 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 MGST1P10620 155 aaKnown RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF25P17030 456 aaPredicted RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BOP23527 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 UCP1P25874 307 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BBP33778 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 RPL29P47914 159 aaKnown RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 CDC34P49427 236 aaPredicted RBP1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TCL1AP56279 114 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 HIST1H2BDP58876 126 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 TAS2R60P59551 318 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 KRTDAPP60985 99 aa1.94□□□□□ -2.1
CHMP4A-208ENST00000534106 SSTP61278 116 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms