RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SFT2D1Q8WV19 159 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 C16orf74Q96GX8 76 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 FAM19A4Q96LR4 140 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 VGLL1Q99990 258 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 PYGO2Q9BRQ0 406 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 NDFIP1Q9BT67 221 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 Q9HAA7 133 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 EPDR1Q9UM22 224 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 TRAV1-1A0A0B4J248 108 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 TRAV12-3A0A0B4J271 114 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 NUPR2A6NF83 97 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 GGTLC3B5MD39 225 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 C11orf94C9JXX5 98 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 F6UZH7 168 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 DEFB4AO15263 64 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 TCRAP04437 139 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 SPART-AS1P0CW21 52 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 PRB4P10163 310 aaPredicted RBP5.45□□□□□ -1.54
CASP4-212ENST00000533730 SULT1A2P50226 295 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 FGF8P55075 233 aaPredicted RBP5.45□□□□□ -1.54
CASP4-212ENST00000533730 CD300CQ08708 224 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 CASC10Q5T4H9 136 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 ZFAND2AQ8N6M9 145 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 TMEM263Q8WUH6 116 aaKnown RBP5.45□□□□□ -1.54
CASP4-212ENST00000533730 HIST1H2BAQ96A08 127 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 LINC00467Q9BRT7 94 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 NBEAL2Q6ZNJ1 2754 aa5.45□□□□□ -1.54
CASP4-212ENST00000533730 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 ZNF705GA8MUZ8 300 aaPredicted RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 RNASE4P34096 147 aaKnown RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 UBE2G2P60604 165 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 GNG5P63218 68 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 FLI1Q01543 452 aaPredicted RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 SAPCD1Q5SSQ6 148 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 TMEM75Q8N9X5 138 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 ZNF680Q8NEM1 530 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 Q8TAT8 98 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 TXNDC17Q9BRA2 123 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 MANBALQ9NQG1 85 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 KLK5Q9Y337 293 aaPredicted RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 CHTOPQ9Y3Y2 248 aaKnown RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 YTHDF2Q9Y5A9 579 aaKnown RBP5.44□□□□□ -1.54
CASP4-212ENST00000533730 TNFRSF18Q9Y5U5 241 aa5.44□□□□□ -1.54
CASP4-212ENST00000533730 IGHV4-4A0A075B6R2 117 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 TRAV10A0A0B4J240 114 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 PEX7O00628 323 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 ZNF324O75467 553 aaPredicted RBP5.43□□□□□ -1.54
CASP4-212ENST00000533730 HTN1P15515 57 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 EMP1P54849 157 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 NANOS2P60321 138 aaKnown RBP5.43□□□□□ -1.54
CASP4-212ENST00000533730 BTN1A1Q13410 526 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 FAM222AQ5U5X8 452 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 Q6AWC8 147 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 ZFAND6Q6FIF0 208 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 CEMP1Q6PRD7 247 aaPredicted RBP5.43□□□□□ -1.54
CASP4-212ENST00000533730 EIF4E3Q8N5X7 224 aaKnown RBP5.43□□□□□ -1.54
CASP4-212ENST00000533730 TREM1Q9NP99 234 aa5.43□□□□□ -1.54
CASP4-212ENST00000533730 TIMM8BQ9Y5J9 83 aaPredicted RBP5.43□□□□□ -1.54
CASP4-212ENST00000533730 IGHV1OR15-1A0A075B7D0 117 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 TRAV8-1A0A0A6YYK1 113 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 TRAV21A0A0B4J279 112 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 IFNA1P01562 189 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
CASP4-212ENST00000533730 TCTAP57738 103 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 DAD1P61803 113 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 UBE2G1P62253 170 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 IBA57Q5T440 356 aaKnown RBP5.42□□□□□ -1.54
CASP4-212ENST00000533730 FMC1Q96HJ9 113 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 CELA1Q9UNI1 258 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 PSG8Q9UQ74 426 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 ZFP30Q9Y2G7 519 aa5.42□□□□□ -1.54
CASP4-212ENST00000533730 TRBV6-1A0A0K0K1D8 114 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 A0A1B0GV50 99 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 IGLV2-11P01706 119 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 AZU1P20160 251 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 AKR1C3P42330 323 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 NKX2-5P52952 324 aaPredicted RBP5.41□□□□□ -1.54
CASP4-212ENST00000533730 C12orf74Q32Q52 190 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 SMUG1Q53HV7 270 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 PRR9Q5T870 116 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 UQCC3Q6UW78 93 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 PRNTQ86SH4 94 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 KCNS1Q96KK3 526 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 GNG13Q9P2W3 67 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
CASP4-212ENST00000533730 DNAH9Q9NYC9 4486 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 DEFB131BA0A096LNP1 70 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 PLAC8L1A1L4L8 177 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 PDE6DO43924 150 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 PFN1P07737 140 aaKnown RBP5.4□□□□□ -1.54
CASP4-212ENST00000533730 ATP5G3P48201 142 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 TCL1AP56279 114 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 DAZ2Q13117 558 aaKnown RBP5.4□□□□□ -1.54
CASP4-212ENST00000533730 TMEM183BQ1AE95 376 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 TDRG1Q3Y452 100 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 ALKAL2Q6UX46 152 aa5.4□□□□□ -1.54
CASP4-212ENST00000533730 Q6ZTC4 211 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms