RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SFRP2Q96HF1 295 aa12.28□□□□□ -0.44
CTSB-229ENST00000533572 RNASE7Q9H1E1 156 aaKnown RBP12.28□□□□□ -0.44
CTSB-229ENST00000533572 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
CTSB-229ENST00000533572 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
CTSB-229ENST00000533572 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
CTSB-229ENST00000533572 A0A1W2PPQ1 181 aa12.27□□□□□ -0.45
CTSB-229ENST00000533572 A8MWL6 223 aa12.27□□□□□ -0.45
CTSB-229ENST00000533572 FAM222AQ5U5X8 452 aa12.27□□□□□ -0.45
CTSB-229ENST00000533572 PTH2Q96A98 100 aa12.27□□□□□ -0.45
CTSB-229ENST00000533572 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
CTSB-229ENST00000533572 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.45
CTSB-229ENST00000533572 TMSB15BA0A087X1C1 80 aa12.26□□□□□ -0.45
CTSB-229ENST00000533572 M0R2P5 195 aa12.26□□□□□ -0.45
CTSB-229ENST00000533572 PPP1R2P9O14990 202 aa12.26□□□□□ -0.45
CTSB-229ENST00000533572 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
CTSB-229ENST00000533572 PIK3CD-AS1Q5SR53 167 aa12.26□□□□□ -0.45
CTSB-229ENST00000533572 OR10G8Q8NGN5 311 aa12.26□□□□□ -0.45
CTSB-229ENST00000533572 ALMS1Q8TCU4 4167 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 IGLL5B9A064 214 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 F2Z2F3 143 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 SPINK4O60575 86 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 OR5AL1P0C617 328 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 TCTAP57738 103 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 RPL19P84098 196 aaKnown RBP12.25□□□□□ -0.45
CTSB-229ENST00000533572 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
CTSB-229ENST00000533572 CARHSP1Q9Y2V2 147 aaKnown RBP12.25□□□□□ -0.45
CTSB-229ENST00000533572 PLECQ15149 4684 aaKnown RBP12.24□□□□□ -0.45
CTSB-229ENST00000533572 H3BVH4 76 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 DAD1P61803 113 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 C12orf74Q32Q52 190 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 SYT8Q8NBV8 401 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 RASL10AQ92737 203 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 ANAPC16Q96DE5 110 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 C18orf15Q96N68 181 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 SSBP4Q9BWG4 385 aaPredicted RBP12.24□□□□□ -0.45
CTSB-229ENST00000533572 GFRA4Q9GZZ7 299 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 PHLDA3Q9Y5J5 127 aa12.24□□□□□ -0.45
CTSB-229ENST00000533572 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
CTSB-229ENST00000533572 SNAI2O43623 268 aa12.23□□□□□ -0.45
CTSB-229ENST00000533572 FER1L6-AS1Q8NA97 138 aa12.23□□□□□ -0.45
CTSB-229ENST00000533572 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
CTSB-229ENST00000533572 SCRT2Q9NQ03 307 aa12.23□□□□□ -0.45
CTSB-229ENST00000533572 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 CIDEAO60543 219 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 IGLC6P0CF74 106 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 ZNF876PQ49A33 203 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 ZFP82Q8N141 532 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 V9GYV3 84 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 DNAH1Q9P2D7 4330 aa12.22□□□□□ -0.45
CTSB-229ENST00000533572 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.45
CTSB-229ENST00000533572 CACNG7P62955 275 aa12.21□□□□□ -0.45
CTSB-229ENST00000533572 WDR73Q6P4I2 378 aa12.21□□□□□ -0.45
CTSB-229ENST00000533572 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 GAGE12BA1L429 117 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 GAGE7O76087 117 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 Q6ZTI0 123 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 SLC7A5P1Q8MH63 180 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 SVBPQ8N300 66 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 BORCS7Q96B45 105 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
CTSB-229ENST00000533572 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 A8MWV9 139 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 CTRLP40313 264 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 RNF212Q495C1 297 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 LGALS9CQ6DKI2 356 aa12.19□□□□□ -0.46
CTSB-229ENST00000533572 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
CTSB-229ENST00000533572 SNAPINO95295 136 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 ATP5G1P05496 136 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 GZMBP10144 247 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 HTN3P15516 51 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 RHEBQ15382 184 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 TPPP3Q9BW30 176 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
CTSB-229ENST00000533572 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 NXPH4O95158 308 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 APOC3P02656 99 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 TMEM242Q9NWH2 141 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 APLNQ9ULZ1 77 aa12.17□□□□□ -0.46
CTSB-229ENST00000533572 SMIM27A0A1W2PRY6 76 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 HIGD1CA8MV81 97 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 M0R381 172 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 CLRN3Q8NCR9 226 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 OR4C5Q8NGB2 326 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 GTSF1Q8WW33 167 aa12.16□□□□□ -0.46
CTSB-229ENST00000533572 A0A087WWC5 75 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms