RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 BTF3P20290 206 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-207ENST00000533115 ZNF506Q5JVG8 444 aa20.73■□□□□ 0.91
SSSCA1-207ENST00000533115 TRBV6-1A0A0K0K1D8 114 aa20.72■□□□□ 0.91
SSSCA1-207ENST00000533115 A0A1B0GV50 99 aa20.72■□□□□ 0.91
SSSCA1-207ENST00000533115 TPT1P13693 172 aaKnown RBP20.72■□□□□ 0.91
SSSCA1-207ENST00000533115 S100A4P26447 101 aaKnown RBP20.72■□□□□ 0.91
SSSCA1-207ENST00000533115 CRIP1P50238 77 aa20.72■□□□□ 0.91
SSSCA1-207ENST00000533115 LOC100131303A0A0U1RQF7 123 aa20.71■□□□□ 0.91
SSSCA1-207ENST00000533115 ASIPP42127 132 aa20.71■□□□□ 0.91
SSSCA1-207ENST00000533115 B4DEV8 164 aa20.7■□□□□ 0.9
SSSCA1-207ENST00000533115 LTAP01374 205 aa20.69■□□□□ 0.9
SSSCA1-207ENST00000533115 H2AFB1P0C5Y9 115 aa20.69■□□□□ 0.9
SSSCA1-207ENST00000533115 AKR1C3P42330 323 aa20.69■□□□□ 0.9
SSSCA1-207ENST00000533115 SH2D6Q7Z4S9 175 aa20.69■□□□□ 0.9
SSSCA1-207ENST00000533115 SH2D1AO60880 128 aa20.68■□□□□ 0.9
SSSCA1-207ENST00000533115 FAM162BQ5T6X4 162 aa20.68■□□□□ 0.9
SSSCA1-207ENST00000533115 SLC25A29Q8N8R3 303 aa20.68■□□□□ 0.9
SSSCA1-207ENST00000533115 IGHV3-73A0A0B4J1V6 119 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 KRBOX1C9JBD0 128 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 MED14OSP0DP75 135 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 LINC00315P59091 139 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 LGALSLQ3ZCW2 172 aaPredicted RBP20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 NHLRC2Q8NBF2 726 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 IL36BQ9NZH7 164 aa20.67■□□□□ 0.9
SSSCA1-207ENST00000533115 TRBV6-4A0A1B0GX49 114 aa20.66■□□□□ 0.9
SSSCA1-207ENST00000533115 PIK3CD-AS1Q5SR53 167 aa20.66■□□□□ 0.9
SSSCA1-207ENST00000533115 ZNF575Q86XF7 245 aa20.66■□□□□ 0.9
SSSCA1-207ENST00000533115 TCTE3Q8IZS6 198 aa20.66■□□□□ 0.9
SSSCA1-207ENST00000533115 PRADC1Q9BSG0 188 aa20.66■□□□□ 0.9
SSSCA1-207ENST00000533115 M0R036 132 aa20.65■□□□□ 0.9
SSSCA1-207ENST00000533115 RHOHQ15669 191 aa20.65■□□□□ 0.9
SSSCA1-207ENST00000533115 ZNF674Q2M3X9 581 aa20.65■□□□□ 0.9
SSSCA1-207ENST00000533115 DNLZQ5SXM8 178 aa20.65■□□□□ 0.9
SSSCA1-207ENST00000533115 WFDC10BQ8IUB3 73 aa20.64■□□□□ 0.89
SSSCA1-207ENST00000533115 LY96Q9Y6Y9 160 aa20.64■□□□□ 0.89
SSSCA1-207ENST00000533115 A8MWV9 139 aa20.63■□□□□ 0.89
SSSCA1-207ENST00000533115 H3BVH4 76 aa20.63■□□□□ 0.89
SSSCA1-207ENST00000533115 S100A9P06702 114 aaKnown RBP20.63■□□□□ 0.89
SSSCA1-207ENST00000533115 TRAV9-2A0A087WT02 112 aa20.62■□□□□ 0.89
SSSCA1-207ENST00000533115 SCO2A0A1W2PP80 73 aa20.62■□□□□ 0.89
SSSCA1-207ENST00000533115 MGST1P10620 155 aaKnown RBP20.62■□□□□ 0.89
SSSCA1-207ENST00000533115 TIRAPP58753 221 aa20.62■□□□□ 0.89
SSSCA1-207ENST00000533115 PARLQ9H300 379 aa20.62■□□□□ 0.89
SSSCA1-207ENST00000533115 GRIFINA4D1Z8 144 aa20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 ARMS2P0C7Q2 107 aa20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 LINC01559Q495D7 138 aa20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 EIF5AL1Q6IS14 154 aaKnown RBP20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 ZFP2Q6ZN57 461 aa20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 Q6ZNX1 250 aa20.61■□□□□ 0.89
SSSCA1-207ENST00000533115 RAB5CP51148 216 aa20.6■□□□□ 0.89
SSSCA1-207ENST00000533115 DMRTA1Q5VZB9 504 aa20.59■□□□□ 0.89
SSSCA1-207ENST00000533115 Q6ZRN7 208 aaPredicted RBP20.59■□□□□ 0.89
SSSCA1-207ENST00000533115 SYT8Q8NBV8 401 aa20.59■□□□□ 0.89
SSSCA1-207ENST00000533115 TMSB15BA0A087X1C1 80 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 C16orf90A8MZG2 172 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 K7EP13 123 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 DNAH10OSP0CZ25 163 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 EVI2AP22794 236 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 CCL20P78556 96 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 Q6ZSN1 163 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 JPT2Q9H910 190 aa20.58■□□□□ 0.89
SSSCA1-207ENST00000533115 TRAV1-1A0A0B4J248 108 aa20.57■□□□□ 0.88
SSSCA1-207ENST00000533115 C1QBP02746 253 aa20.57■□□□□ 0.88
SSSCA1-207ENST00000533115 MANBALQ9NQG1 85 aa20.57■□□□□ 0.88
SSSCA1-207ENST00000533115 UFSP1Q6NVU6 142 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 BAGE2Q86Y30 109 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 MLST8Q9BVC4 326 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 SCRT2Q9NQ03 307 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 GNG13Q9P2W3 67 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 TNFRSF18Q9Y5U5 241 aa20.56■□□□□ 0.88
SSSCA1-207ENST00000533115 SPATA12Q7Z6I5 190 aa20.55■□□□□ 0.88
SSSCA1-207ENST00000533115 SAMD10Q9BYL1 202 aa20.55■□□□□ 0.88
SSSCA1-207ENST00000533115 PHLDA3Q9Y5J5 127 aa20.55■□□□□ 0.88
SSSCA1-207ENST00000533115 SULT1A2P50226 295 aa20.54■□□□□ 0.88
SSSCA1-207ENST00000533115 NFE4Q86UQ8 179 aa20.54■□□□□ 0.88
SSSCA1-207ENST00000533115 ATP6V0E2Q8NHE4 81 aa20.53■□□□□ 0.88
SSSCA1-207ENST00000533115 TEX46H3BTG2 121 aa20.52■□□□□ 0.88
SSSCA1-207ENST00000533115 SLC51BQ86UW2 128 aa20.52■□□□□ 0.88
SSSCA1-207ENST00000533115 MSRB1Q9NZV6 116 aa20.52■□□□□ 0.88
SSSCA1-207ENST00000533115 TRAV8-6A0A0B4J262 113 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 IGHV3-38A0A0C4DH36 116 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 RHODO00212 210 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 CRYGDP07320 174 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 C10orf126Q8N4M7 172 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 SFRP2Q96HF1 295 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 GTSF1LQ9H1H1 148 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 RYR1P21817 5038 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 LRP1BQ9NZR2 4599 aa20.51■□□□□ 0.87
SSSCA1-207ENST00000533115 M0R381 172 aa20.5■□□□□ 0.87
SSSCA1-207ENST00000533115 RPL35P42766 123 aaKnown RBP20.5■□□□□ 0.87
SSSCA1-207ENST00000533115 OR10J3Q5JRS4 329 aa20.5■□□□□ 0.87
SSSCA1-207ENST00000533115 C11orf52Q96A22 123 aa20.5■□□□□ 0.87
SSSCA1-207ENST00000533115 GAGE12JA6NER3 117 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 GAGE1Q13065 139 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 GAGE4Q13068 117 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 GAGE5Q13069 117 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 GAGE13Q4V321 117 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 LELP1Q5T871 98 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 ZFP82Q8N141 532 aa20.49■□□□□ 0.87
SSSCA1-207ENST00000533115 BOLA1Q9Y3E2 137 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms