RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 A6NDN8 102 aa11.21□□□□□ -0.62
SSH3-210ENST00000532881 H3BRM9 83 aa11.21□□□□□ -0.62
SSH3-210ENST00000532881 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.62
SSH3-210ENST00000532881 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.62
SSH3-210ENST00000532881 A0A087WWL8 130 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 ANKRD17O75179 2603 aaKnown RBP11.2□□□□□ -0.62
SSH3-210ENST00000532881 ASIPP42127 132 aa11.2□□□□□ -0.62
SSH3-210ENST00000532881 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
SSH3-210ENST00000532881 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 MSMBP08118 114 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
SSH3-210ENST00000532881 AKAP9Q99996 3911 aa11.19□□□□□ -0.62
SSH3-210ENST00000532881 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 CRIP2P52943 208 aaPredicted RBP11.18□□□□□ -0.62
SSH3-210ENST00000532881 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 SCGB3A1Q96QR1 104 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 LRRK2Q5S007 2527 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 A0A087WX48 190 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
SSH3-210ENST00000532881 SIVA1O15304 175 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 ATP5LO75964 103 aa11.18□□□□□ -0.62
SSH3-210ENST00000532881 OVOL1O14753 267 aa11.17□□□□□ -0.62
SSH3-210ENST00000532881 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
SSH3-210ENST00000532881 CDKN1BP46527 198 aa11.17□□□□□ -0.62
SSH3-210ENST00000532881 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
SSH3-210ENST00000532881 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
SSH3-210ENST00000532881 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 FAM19A4Q96LR4 140 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 TLN2Q9Y4G6 2542 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
SSH3-210ENST00000532881 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.62
SSH3-210ENST00000532881 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
SSH3-210ENST00000532881 PRB1P04280 392 aa11.15□□□□□ -0.62
SSH3-210ENST00000532881 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
SSH3-210ENST00000532881 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
SSH3-210ENST00000532881 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
SSH3-210ENST00000532881 PTPN13Q12923 2485 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 PRSS47A8MTI9 375 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 K7EP34 96 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 PRM2P04554 102 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 CD7P09564 240 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 SMIM13P0DJ93 91 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 PSMG4Q5JS54 123 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 MTURNQ8N3F0 131 aa11.15□□□□□ -0.63
SSH3-210ENST00000532881 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.63
SSH3-210ENST00000532881 DCANP1Q8TF63 244 aa11.14□□□□□ -0.63
SSH3-210ENST00000532881 F5H697 171 aa11.14□□□□□ -0.63
SSH3-210ENST00000532881 BAALCQ8WXS3 180 aa11.14□□□□□ -0.63
SSH3-210ENST00000532881 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
SSH3-210ENST00000532881 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
SSH3-210ENST00000532881 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 LINC00315P59091 139 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 CEND1Q8N111 149 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 KLHL30-AS1Q8NEE0 82 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 TOMM6Q96B49 74 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 NF1P21359 2839 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 CFHR3Q02985 330 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 NEXN-AS1Q8NBZ9 246 aa11.13□□□□□ -0.63
SSH3-210ENST00000532881 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
SSH3-210ENST00000532881 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 F8VRH5 84 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
SSH3-210ENST00000532881 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 H7C1H1 209 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 HTN1P15515 57 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 GTF2H5Q6ZYL4 71 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
SSH3-210ENST00000532881 TSHBP01222 138 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 KIF25-AS1Q9Y6Z4 181 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
SSH3-210ENST00000532881 SUMO4Q6EEV6 95 aa11.11□□□□□ -0.63
SSH3-210ENST00000532881 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
SSH3-210ENST00000532881 KLLNB2CW77 178 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 CRYGDP07320 174 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 PSMB8P28062 276 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 ORMDL2Q53FV1 153 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
SSH3-210ENST00000532881 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms