RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SUMO4Q6EEV6 95 aa11.52□□□□□ -0.57
PCDHA9-202ENST00000532602 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
PCDHA9-202ENST00000532602 NDUFS6O75380 124 aaKnown RBP11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 PYY3Q5JQD4 70 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 CRLF1O75462 422 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 XCL1P47992 114 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 MRPL35Q9NZE8 188 aaKnown RBP11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 J3QQQ9 107 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 SPANXA1Q9NS26 97 aa11.51□□□□□ -0.57
PCDHA9-202ENST00000532602 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 A0A087WW49 117 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 ATP6V0E2Q8NHE4 81 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 Q8N7P7 452 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 K7EMT4 169 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 Q8N9W7 124 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 I3L2K1 104 aa11.5□□□□□ -0.57
PCDHA9-202ENST00000532602 INSL3P51460 131 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 K7EIM0 57 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 CFHR4Q92496 578 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 TNRC6AQ8NDV7 1962 aaKnown RBP11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 GYPEP15421 78 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 Q6ZQT7 251 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 C20orf144Q9BQM9 153 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 MED13Q9UHV7 2174 aa11.49□□□□□ -0.57
PCDHA9-202ENST00000532602 CTSGP08311 255 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 DSCR8Q96T75 97 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 EGR2P11161 476 aaPredicted RBP11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
PCDHA9-202ENST00000532602 Q6ZSR3 168 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 SONP18583 2426 aaKnown RBP11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 NUP210LQ5VU65 1888 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 HERV-K104P63124 156 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 ANKHD1Q8IWZ3 2542 aaKnown RBP11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 IL17DQ8TAD2 202 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 BUB3O43684 328 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 UTF1Q5T230 341 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 ADAMTSL5Q6ZMM2 481 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 PRO1854Q9UHT4 67 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 K7EQD1 137 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
PCDHA9-202ENST00000532602 PLCE1Q9P212 2302 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 Q6ZWC4 215 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 DAZ4Q86SG3 579 aaKnown RBP11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 DAZ3Q9NR90 486 aaKnown RBP11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 C22orf34Q6ZV56 151 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 ZNF664Q8N3J9 261 aa11.46□□□□□ -0.57
PCDHA9-202ENST00000532602 DLEU1O43261 78 aa11.46□□□□□ -0.58
PCDHA9-202ENST00000532602 IGHG2P01859 326 aa11.46□□□□□ -0.58
PCDHA9-202ENST00000532602 UBE2V1Q13404 147 aa11.46□□□□□ -0.58
PCDHA9-202ENST00000532602 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
PCDHA9-202ENST00000532602 FGF6P10767 208 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 K7EN84 100 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 BOD1L2Q8IYS8 172 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 IGLV1-47P01700 117 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 HAMPP81172 84 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 MORN5Q5VZ52 161 aa11.45□□□□□ -0.58
PCDHA9-202ENST00000532602 COX8AP10176 69 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 EML6Q6ZMW3 1958 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 ETDCA0A1B0GVM5 59 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 IL15RAQ13261 267 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 ZNF503Q96F45 646 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
PCDHA9-202ENST00000532602 E7EUB6 86 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 DEFB4AO15263 64 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 CRYGCP07315 174 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 CITED2Q99967 270 aaPredicted RBP11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 DEFB1P60022 68 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 ODF3L1Q8IXM7 274 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 CSPG4Q6UVK1 2322 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 DYSFO75923 2080 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 COX7A2LO14548 114 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 SIRPDQ9H106 197 aa11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
PCDHA9-202ENST00000532602 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 Q9H8V8 135 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 PTPRSQ13332 1948 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 RPL18AQ02543 176 aaKnown RBP11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 BVES-AS1Q5T3Y7 98 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 TRBV12-3P01733 135 aa11.42□□□□□ -0.58
PCDHA9-202ENST00000532602 TIRAPP58753 221 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms