RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 B4DEV8 164 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 M0R036 132 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 RS1O15537 224 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 ESRGQ1W209 222 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
TSPAN4-220ENST00000532375 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 C9JCJ5 164 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 PDE6DO43924 150 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 IFNA1P01562 189 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 SLAQ13239 276 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 CFAP126Q5VTH2 177 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 FAT2Q9NYQ8 4349 aa9.64□□□□□ -0.87
TSPAN4-220ENST00000532375 PAX4O43316 350 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 ARMS2P0C7Q2 107 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 ASIPP42127 132 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 CENPWQ5EE01 88 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 Q6ZR54 194 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 OR4C5Q8NGB2 326 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
TSPAN4-220ENST00000532375 TMSB15BA0A087X1C1 80 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 H3BVH4 76 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 FAM3BP58499 235 aaPredicted RBP9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 JPT2Q9H910 190 aa9.62□□□□□ -0.87
TSPAN4-220ENST00000532375 CXCL1P09341 107 aa9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 S100A4P26447 101 aaKnown RBP9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 CCL18P55774 89 aa9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 TEX261Q6UWH6 196 aa9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 SMIM12Q96EX1 92 aa9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
TSPAN4-220ENST00000532375 K7EQD1 137 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 CIDEAO60543 219 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 PRR27Q6MZM9 219 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 Q6ZSN1 163 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 SAMD10Q9BYL1 202 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 PARLQ9H300 379 aa9.6□□□□□ -0.87
TSPAN4-220ENST00000532375 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 LOC100131303A0A0U1RQF7 123 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 TMEM250H0YL14 139 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 M0R2N4 97 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 SNAI2O43623 268 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 NDUFS6O75380 124 aaKnown RBP9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 MED14OSP0DP75 135 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 GNG4P50150 75 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 SLC25A29Q8N8R3 303 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 PCNPQ8WW12 178 aaKnown RBP9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 FAM210AQ96ND0 272 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
TSPAN4-220ENST00000532375 IGHV3-73A0A0B4J1V6 119 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 A8MWV9 139 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 NXPH4O95158 308 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 CRYGDP07320 174 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 GYPEP15421 78 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 Q9UF83 564 aa9.58□□□□□ -0.88
TSPAN4-220ENST00000532375 TRBV6-4A0A1B0GX49 114 aa9.57□□□□□ -0.88
TSPAN4-220ENST00000532375 K7EN84 100 aa9.57□□□□□ -0.88
TSPAN4-220ENST00000532375 OR5AL1P0C617 328 aa9.57□□□□□ -0.88
TSPAN4-220ENST00000532375 TOR2AQ5JU69 321 aa9.57□□□□□ -0.88
TSPAN4-220ENST00000532375 PHLDA3Q9Y5J5 127 aa9.57□□□□□ -0.88
TSPAN4-220ENST00000532375 RTL8CO15255 209 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 SRP19P09132 144 aaKnown RBP9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 NUDT10Q8NFP7 164 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 OR10AG1Q8NH19 301 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 Q9H8V8 135 aa9.56□□□□□ -0.88
TSPAN4-220ENST00000532375 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 C9JQL5 133 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 M0R381 172 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 GZMBP10144 247 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
TSPAN4-220ENST00000532375 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
TSPAN4-220ENST00000532375 LINC00694P0DN24 101 aa9.54□□□□□ -0.88
TSPAN4-220ENST00000532375 C14orf178Q8N769 122 aaPredicted RBP9.54□□□□□ -0.88
TSPAN4-220ENST00000532375 OR2D3Q8NGH3 330 aa9.54□□□□□ -0.88
TSPAN4-220ENST00000532375 EIF5A2Q9GZV4 153 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms