RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 H7BYZ3 331 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 IGKV2D-40P01614 121 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 ARL14EPLP0DKL9 152 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 HTN1P15515 57 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF345Q14585 488 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 FAM74A1Q5RGS3 127 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 AKR1C8PQ5T2L2 129 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMEM78Q5T7P6 136 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 FAM222AQ5U5X8 452 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 GFI1BQ5VTD9 330 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 Q6ZTC4 211 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF767PQ75MW2 155 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 NFE4Q86UQ8 179 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 KCNRGQ8N5I3 272 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 CMTM2Q8TAZ6 248 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 HYLS1Q96M11 299 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 VGLL1Q99990 258 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 C20orf144Q9BQM9 153 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 AGPAT4-IT1Q9H0P7 198 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 CELA1Q9UNI1 258 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 YTHDF2Q9Y5A9 579 aaKnown RBP4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 AGRNO00468 2067 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 TRAV10A0A0B4J240 114 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 A0A0D9SG52 128 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 LOC100131303A0A0U1RQF7 123 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 RBAKDNA6NC62 111 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 PGPA6NDG6 321 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 E9PLD3 99 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 K7EQD1 137 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 CXorf1O96002 111 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 ORM1P02763 201 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 PRM2P04554 102 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 SLC25A5P05141 298 aaKnown RBP4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 GPX1P07203 203 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 NMBP08949 121 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 AZU1P20160 251 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 GCHFRP30047 84 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 RNASE4P34096 147 aaKnown RBP4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF138P52744 262 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 KIAA1644Q3SXP7 199 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 C11orf52Q96A22 123 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 C16orf74Q96GX8 76 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 CYTL1Q9NRR1 136 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMEM167BQ9NRX6 74 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF492Q9P255 531 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 DNAH7Q8WXX0 4024 aa4.11□□□□□ -1.75
HMGB1P42-201ENST00000532126 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 DEFB131BA0A096LNP1 70 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 CTXND1A0A1B0GTU2 59 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 C7orf71A4D174 169 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 KLLNB2CW77 178 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 IGLL5B9A064 214 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 K7EN84 100 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 BCL2L11O43521 198 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 GCGP01275 180 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 CRISP2P16562 243 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 RAB5AP20339 215 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 NKX2-5P52952 324 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 TCTAP57738 103 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 EIF5AP63241 154 aaKnown RBP4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 CD300CQ08708 224 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 BTN1A1Q13410 526 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 PDZD11Q5EBL8 140 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF493Q6ZR52 646 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 GOLT1AQ6ZVE7 132 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 TCTE3Q8IZS6 198 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 Q8TAT8 98 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMEM263Q8WUH6 116 aaKnown RBP4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 PYGO2Q9BRQ0 406 aa4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF471Q9BX82 626 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
HMGB1P42-201ENST00000532126 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 A6NDN8 102 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 UMAD1C9J7I0 102 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 LY6G6CO95867 125 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 SEC11BP0C7V7 166 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 HTN3P15516 51 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 RAB4AP20338 218 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 DAD1P61803 113 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 GNG5P63218 68 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 TWIST1Q15672 202 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZFAND2AQ8N6M9 145 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 STPG4Q8N801 248 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 C5orf17Q8NAS9 161 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 STOML3Q8TAV4 291 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 TIMM8BQ9Y5J9 83 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 LENEPQ9Y5L5 61 aa4.09□□□□□ -1.75
HMGB1P42-201ENST00000532126 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms