RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MYOM2P54296 1465 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 POLEQ07864 2286 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 A0A0J9YY99 117 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 MCRIP1C9JLW8 97 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 CCL25O15444 150 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 IL5P05113 134 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 IL9P15248 144 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 SPRNQ5BIV9 151 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 Q6AWC8 147 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 TMEM242Q9NWH2 141 aa1.64□□□□□ -2.15
USP47-211ENST00000531513 PHLPP1O60346 1717 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 TRBV6-7A0A0A0MS04 114 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 TMEM218A2RU14 115 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 KLF7O75840 302 aaPredicted RBP1.63□□□□□ -2.15
USP47-211ENST00000531513 SNCGO76070 127 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 DNAL4O96015 105 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 MRPL54Q6P161 138 aaKnown RBP1.63□□□□□ -2.15
USP47-211ENST00000531513 UNQ5815/PRO19632Q6UWF5 114 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 NDUFA11Q86Y39 141 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 DAPK1P53355 1430 aa1.63□□□□□ -2.15
USP47-211ENST00000531513 DIDO1Q9BTC0 2240 aaKnown RBP1.63□□□□□ -2.15
USP47-211ENST00000531513 SCN3AQ9NY46 2000 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 MYOFQ9NZM1 2061 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 MAPKBP1O60336 1514 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 TRAV30A0A087WSZ9 112 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 SPAARA0A1B0GVQ0 90 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 A6NIN4 97 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 GYPBP06028 91 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 PIRTP0C851 137 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 GDF5OSQ5U4N7 250 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 LINC00322Q6ZN03 302 aaPredicted RBP1.62□□□□□ -2.15
USP47-211ENST00000531513 TMEM141Q96I45 108 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 TMEM14CQ9P0S9 112 aa1.62□□□□□ -2.15
USP47-211ENST00000531513 TRAV17A0A0B4J275 112 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 IFNA17P01571 189 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 IGHV3-30P01768 117 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 PRB1P04280 392 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 IGHV3-30-5P0DP03 117 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 SVBPQ8N300 66 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 C10orf105Q8TEF2 133 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 LINC00526Q96FQ7 95 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 DMAC1Q96GE9 116 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 MRPL57Q9BQC6 102 aaKnown RBP1.61□□□□□ -2.15
USP47-211ENST00000531513 ATG5Q9H1Y0 275 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 NDUFA12Q9UI09 145 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 KIAA1549Q9HCM3 1950 aa1.61□□□□□ -2.15
USP47-211ENST00000531513 TANC2Q9HCD6 1990 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 JMJD7-PLA2G4BH0Y9G9 81 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 HSD52Q0P140 79 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 CATR1Q13166 79 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 C9orf153Q5TBE3 101 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 RPL7L1Q6DKI1 246 aaKnown RBP1.6□□□□□ -2.15
USP47-211ENST00000531513 LYPD5Q6UWN5 251 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 Q6ZS92 163 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 TSKUQ8WUA8 353 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 FOCADQ5VW36 1801 aa1.6□□□□□ -2.15
USP47-211ENST00000531513 KIDINS220Q9ULH0 1771 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 INTS1Q8N201 2190 aaKnown RBP1.59□□□□□ -2.15
USP47-211ENST00000531513 CNTLNQ9NXG0 1405 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 PZPP20742 1482 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 TRBV10-1A0A0K0K1A3 114 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 M0R143 59 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 PPYP01298 95 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 SLC25A6P12236 298 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 IFITM1P13164 125 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 IL7P13232 177 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 CBLN1P23435 193 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 NPC2P61916 151 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 SLC48A1Q6P1K1 146 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 C4orf33Q8N1A6 199 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 AQP10Q96PS8 301 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 MRPL36Q9P0J6 103 aaKnown RBP1.59□□□□□ -2.15
USP47-211ENST00000531513 C22orf24Q9Y442 160 aa1.59□□□□□ -2.15
USP47-211ENST00000531513 MCM3APO60318 1980 aa1.59□□□□□ -2.16
USP47-211ENST00000531513 SDK1Q7Z5N4 2213 aa1.59□□□□□ -2.16
USP47-211ENST00000531513 SIP14410 1827 aa1.59□□□□□ -2.16
USP47-211ENST00000531513 FREM3P0C091 2139 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 ALPK3Q96L96 1907 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.58□□□□□ -2.16
USP47-211ENST00000531513 EXPH5Q8NEV8 1989 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 CXorf51AA0A1B0GTR3 108 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 NUPR2A6NF83 97 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 FAM24AA6NFZ4 105 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 PDE6GP18545 87 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
USP47-211ENST00000531513 LSM10Q969L4 123 aaKnown RBP1.58□□□□□ -2.16
USP47-211ENST00000531513 KIAA1549LQ6ZVL6 1849 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 MYH1P12882 1939 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 SORL1Q92673 2214 aa1.58□□□□□ -2.16
USP47-211ENST00000531513 IGKCP01834 107 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 LYNX1P0DP58 116 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 PKIAP61925 76 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 SPATA45Q537H7 98 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 CSAG1Q6PB30 78 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 ZFC3H1O60293 1989 aaKnown RBP1.57□□□□□ -2.16
USP47-211ENST00000531513 OTOGLQ3ZCN5 2332 aa1.57□□□□□ -2.16
USP47-211ENST00000531513 HIGD1CA8MV81 97 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms