RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 C9JQL5 133 aa12.52□□□□□ -0.41
PTPN11-204ENST00000531326 SMIM12Q96EX1 92 aa12.52□□□□□ -0.41
PTPN11-204ENST00000531326 HSPG2P98160 4391 aa12.52□□□□□ -0.41
PTPN11-204ENST00000531326 KRBOX1C9JBD0 128 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 SPINK4O60575 86 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 ORM1P02763 201 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 CEBPGP53567 150 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 Q6ZTI0 123 aa12.51□□□□□ -0.41
PTPN11-204ENST00000531326 M0R036 132 aa12.5□□□□□ -0.41
PTPN11-204ENST00000531326 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
PTPN11-204ENST00000531326 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
PTPN11-204ENST00000531326 GAGE12BA1L429 117 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 B4DEV8 164 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 GAGE7O76087 117 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 GAGE12FP0CL80 117 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 GAGE12GP0CL81 117 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 GAGE12IP0CL82 117 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 MGST1P10620 155 aaKnown RBP12.49□□□□□ -0.41
PTPN11-204ENST00000531326 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
PTPN11-204ENST00000531326 PEA15Q15121 130 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 OCC1Q8TAD7 63 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
PTPN11-204ENST00000531326 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
PTPN11-204ENST00000531326 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
PTPN11-204ENST00000531326 K7EN84 100 aa12.48□□□□□ -0.41
PTPN11-204ENST00000531326 SPXQ9BT56 116 aa12.48□□□□□ -0.41
PTPN11-204ENST00000531326 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
PTPN11-204ENST00000531326 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
PTPN11-204ENST00000531326 FAM3BP58499 235 aaPredicted RBP12.47□□□□□ -0.41
PTPN11-204ENST00000531326 RPL19P84098 196 aaKnown RBP12.47□□□□□ -0.41
PTPN11-204ENST00000531326 OR5I1Q13606 314 aa12.47□□□□□ -0.41
PTPN11-204ENST00000531326 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
PTPN11-204ENST00000531326 SMIM7Q9BQ49 75 aa12.47□□□□□ -0.41
PTPN11-204ENST00000531326 LRP1BQ9NZR2 4599 aa12.46□□□□□ -0.41
PTPN11-204ENST00000531326 GRIFINA4D1Z8 144 aa12.46□□□□□ -0.41
PTPN11-204ENST00000531326 ASIPP42127 132 aa12.46□□□□□ -0.41
PTPN11-204ENST00000531326 TNP2Q05952 138 aa12.46□□□□□ -0.41
PTPN11-204ENST00000531326 C18orf15Q96N68 181 aa12.46□□□□□ -0.41
PTPN11-204ENST00000531326 ZNF727A8MUV8 499 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 M0R2P5 195 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 RASL10AQ92737 203 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 LY96Q9Y6Y9 160 aa12.45□□□□□ -0.42
PTPN11-204ENST00000531326 ATP5G1P05496 136 aa12.44□□□□□ -0.42
PTPN11-204ENST00000531326 CXCL1P09341 107 aa12.44□□□□□ -0.42
PTPN11-204ENST00000531326 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
PTPN11-204ENST00000531326 IL36BQ9NZH7 164 aa12.44□□□□□ -0.42
PTPN11-204ENST00000531326 TRGV2A0A075B6R0 118 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 NBDYA0A0U1RRE5 68 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 F5H768 121 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 H3BVH4 76 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 FAM74A3Q4VXF1 159 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 LINC01551Q86U37 167 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 PTH2Q96A98 100 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 DAZAP1Q96EP5 407 aaKnown RBP12.43□□□□□ -0.42
PTPN11-204ENST00000531326 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
PTPN11-204ENST00000531326 NUDT3O95989 172 aa12.42□□□□□ -0.42
PTPN11-204ENST00000531326 P01737 135 aa12.42□□□□□ -0.42
PTPN11-204ENST00000531326 HOXA5P20719 270 aa12.41□□□□□ -0.42
PTPN11-204ENST00000531326 ZNF876PQ49A33 203 aa12.41□□□□□ -0.42
PTPN11-204ENST00000531326 OR2D3Q8NGH3 330 aa12.41□□□□□ -0.42
PTPN11-204ENST00000531326 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
PTPN11-204ENST00000531326 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
PTPN11-204ENST00000531326 C16orf90A8MZG2 172 aa12.4□□□□□ -0.42
PTPN11-204ENST00000531326 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
PTPN11-204ENST00000531326 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
PTPN11-204ENST00000531326 SNAI2O43623 268 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 GZMBP10144 247 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 RPS20P60866 119 aaKnown RBP12.39□□□□□ -0.43
PTPN11-204ENST00000531326 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
PTPN11-204ENST00000531326 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
PTPN11-204ENST00000531326 TRAV4A0A0B4J268 109 aa12.38□□□□□ -0.43
PTPN11-204ENST00000531326 CDK2AP2O75956 126 aa12.38□□□□□ -0.43
PTPN11-204ENST00000531326 IGLC6P0CF74 106 aa12.38□□□□□ -0.43
PTPN11-204ENST00000531326 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
PTPN11-204ENST00000531326 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
PTPN11-204ENST00000531326 ZNF479Q96JC4 524 aa12.38□□□□□ -0.43
PTPN11-204ENST00000531326 RPP21Q9H633 154 aaKnown RBP12.38□□□□□ -0.43
PTPN11-204ENST00000531326 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
PTPN11-204ENST00000531326 RS1O15537 224 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 CCL18P55774 89 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 FHL2Q14192 279 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
PTPN11-204ENST00000531326 LINC00862A6NCI5 91 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 OR5AL1P0C617 328 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms