RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SNURFLB1AK76 121 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 UBE2CO00762 179 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 GZMBP10144 247 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 APOC4P55056 127 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 LINC00310P59036 64 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
CTNND1-228ENST00000531007 TMEM136Q6ZRR5 245 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 PHLDA3Q9Y5J5 127 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 NBEAL1Q6ZS30 2694 aa7.22□□□□□ -1.25
CTNND1-228ENST00000531007 ANK2Q01484 3957 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 LOC102724200A0A096LPH7 203 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-228ENST00000531007 GRIFINA4D1Z8 144 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 CBY3A6NI87 242 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 A8MZ25 164 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TRGC2P03986 189 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 ARMS2P0C7Q2 107 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TRGC1P0CF51 173 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 RAB4BP61018 213 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TWIST1Q15672 202 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 MUC21Q5SSG8 566 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 ZFP82Q8N141 532 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 SYT8Q8NBV8 401 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 FRZBQ92765 325 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 SPXQ9BT56 116 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TMEM208Q9BTX3 173 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TPPP3Q9BW30 176 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 TMEM191AQ9H0A3 160 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
CTNND1-228ENST00000531007 IGHV3-16A0A0C4DH30 117 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 SPINK4O60575 86 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 NXPH4O95158 308 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 APCSP02743 223 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 NTF3P20783 257 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 CAMPP49913 170 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 KIR3DS1Q14943 382 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 Q8N1Y9 231 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 LINC01587Q99440 93 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 SORL1Q92673 2214 aa7.2□□□□□ -1.26
CTNND1-228ENST00000531007 DNHD1Q96M86 4753 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 SMIM9A6NGZ8 99 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 H3BVH4 76 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 PHOX2AO14813 284 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 GNRH2O43555 120 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
CTNND1-228ENST00000531007 FXYD7P58549 80 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 FABP9Q0Z7S8 132 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 MGAM2Q2M2H8 2515 aa7.19□□□□□ -1.26
CTNND1-228ENST00000531007 PPBPP02775 128 aa7.18□□□□□ -1.26
CTNND1-228ENST00000531007 S100A6P06703 90 aa7.18□□□□□ -1.26
CTNND1-228ENST00000531007 RPL35AP18077 110 aaKnown RBP7.18□□□□□ -1.26
CTNND1-228ENST00000531007 ZNF705AQ6ZN79 300 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-228ENST00000531007 CSNK1G2-AS1Q8NCQ2 148 aa7.18□□□□□ -1.26
CTNND1-228ENST00000531007 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
CTNND1-228ENST00000531007 AP1S3Q96PC3 154 aa7.18□□□□□ -1.26
CTNND1-228ENST00000531007 LAMTOR2Q9Y2Q5 125 aa7.18□□□□□ -1.26
CTNND1-228ENST00000531007 VWFP04275 2813 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 AGRNO00468 2067 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
CTNND1-228ENST00000531007 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
CTNND1-228ENST00000531007 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
CTNND1-228ENST00000531007 OR10J3Q5JRS4 329 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 FAM104BQ5XKR9 115 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 Q6ZQT7 251 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 OR10AG1Q8NH19 301 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 C16orf74Q96GX8 76 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 TRRAPQ9Y4A5 3859 aa7.17□□□□□ -1.26
CTNND1-228ENST00000531007 M0R2P5 195 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 CIDEAO60543 219 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BKO60814 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 PPP1R17O96001 155 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BJP06899 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BOP23527 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BBP33778 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BDP58876 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BCP62807 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 Q0VG73 95 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST2H2BEQ16778 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 LGALS9BQ3B8N2 356 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.16□□□□□ -1.26
CTNND1-228ENST00000531007 Q6ZWC4 215 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BHQ93079 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 MRAP2Q96G30 205 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BNQ99877 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 HIST1H2BMQ99879 126 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
CTNND1-228ENST00000531007 TMA7Q9Y2S6 64 aaKnown RBP7.16□□□□□ -1.26
CTNND1-228ENST00000531007 A8MWV9 139 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms