RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 HIGD1BQ9P298 99 aa12.9□□□□□ -0.34
BRCA2-204ENST00000530893 CELSR2Q9HCU4 2923 aa12.9□□□□□ -0.34
BRCA2-204ENST00000530893 EDN2P20800 178 aa12.89□□□□□ -0.35
BRCA2-204ENST00000530893 C7orf71A4D174 169 aa12.89□□□□□ -0.35
BRCA2-204ENST00000530893 RPL32P62910 135 aaKnown RBP12.89□□□□□ -0.35
BRCA2-204ENST00000530893 UBE2E2Q96LR5 201 aa12.89□□□□□ -0.35
BRCA2-204ENST00000530893 CSPG4Q6UVK1 2322 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 A0A087WW49 117 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 CBY3A6NI87 242 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 MGPP08493 103 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 C10orf99Q6UWK7 81 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
BRCA2-204ENST00000530893 A0A0J9YX75 114 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 K7EQG2 157 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 KIF25-AS1Q9Y6Z4 181 aa12.88□□□□□ -0.35
BRCA2-204ENST00000530893 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
BRCA2-204ENST00000530893 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
BRCA2-204ENST00000530893 IGKV2D-26A0A0A0MRZ7 120 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 H3BRM9 83 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 H7C1H1 209 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 IGHV4-31P0DP07 118 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 TCTAP57738 103 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 ZNF702PQ9H963 129 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
BRCA2-204ENST00000530893 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 F8VRH5 84 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 LINC00315P59091 139 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 LRRC75A-AS1Q8N1F1 130 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
BRCA2-204ENST00000530893 SPRY2O43597 315 aa12.85□□□□□ -0.35
BRCA2-204ENST00000530893 CD7P09564 240 aa12.85□□□□□ -0.35
BRCA2-204ENST00000530893 ANKRD17O75179 2603 aaKnown RBP12.85□□□□□ -0.35
BRCA2-204ENST00000530893 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 DUSP14O95147 198 aaKnown RBP12.84□□□□□ -0.35
BRCA2-204ENST00000530893 PRB1P04280 392 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 SYNJ2BPP57105 145 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 GTSCR1Q86UQ5 136 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 KMT2BQ9UMN6 2715 aaPredicted RBP12.84□□□□□ -0.35
BRCA2-204ENST00000530893 K7EP13 123 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 C2orf66Q6UXQ4 117 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 MAPK1IP1LQ8NDC0 245 aa12.84□□□□□ -0.35
BRCA2-204ENST00000530893 MUC4Q99102 2169 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
BRCA2-204ENST00000530893 CDKN1BP46527 198 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 AMMECR1LQ6DCA0 310 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 CRYBG3Q68DQ2 2970 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 C9orf118A6NHY6 69 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 ERASQ7Z444 233 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
BRCA2-204ENST00000530893 MAP1AP78559 2803 aaPredicted RBP12.82□□□□□ -0.36
BRCA2-204ENST00000530893 HOXA3O43365 443 aaPredicted RBP12.82□□□□□ -0.36
BRCA2-204ENST00000530893 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
BRCA2-204ENST00000530893 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
BRCA2-204ENST00000530893 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
BRCA2-204ENST00000530893 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
BRCA2-204ENST00000530893 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
BRCA2-204ENST00000530893 TRBV25-1A0A075B6N4 114 aa12.81□□□□□ -0.36
BRCA2-204ENST00000530893 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
BRCA2-204ENST00000530893 Q8N2B8 174 aa12.81□□□□□ -0.36
BRCA2-204ENST00000530893 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
BRCA2-204ENST00000530893 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
BRCA2-204ENST00000530893 POLR2KP53803 58 aaKnown RBP12.81□□□□□ -0.36
BRCA2-204ENST00000530893 CR1P17927 2039 aa12.8□□□□□ -0.36
BRCA2-204ENST00000530893 VCYO14598 125 aa12.8□□□□□ -0.36
BRCA2-204ENST00000530893 SUMO4Q6EEV6 95 aa12.8□□□□□ -0.36
BRCA2-204ENST00000530893 PRRC2AP48634 2157 aaKnown RBP12.8□□□□□ -0.36
BRCA2-204ENST00000530893 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 TRBV6-5A0A0K0K1A5 114 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 TAL2Q16559 108 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 BAALCQ8WXS3 180 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 CYSLTR1Q9Y271 337 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
BRCA2-204ENST00000530893 Q5PR19 223 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 WFDC12Q8WWY7 111 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 KIR2DL4Q99706 377 aa12.79□□□□□ -0.36
BRCA2-204ENST00000530893 USP9YO00507 2555 aaPredicted RBP12.78□□□□□ -0.36
BRCA2-204ENST00000530893 GTF2H5Q6ZYL4 71 aa12.78□□□□□ -0.36
BRCA2-204ENST00000530893 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
BRCA2-204ENST00000530893 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
BRCA2-204ENST00000530893 Q8N1Y9 231 aa12.78□□□□□ -0.36
BRCA2-204ENST00000530893 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
BRCA2-204ENST00000530893 FBN2P35556 2912 aa12.77□□□□□ -0.36
BRCA2-204ENST00000530893 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 TRAV2A0A0B4J234 112 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 JPT2Q9H910 190 aa12.77□□□□□ -0.37
BRCA2-204ENST00000530893 GAGE10A6NGK3 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms