RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ATOX1O00244 68 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 IGKV2D-40P01614 121 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 DLX6P56179 175 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 LST1O00453 97 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 SUMO2P61956 95 aaKnown RBP6.19□□□□□ -1.42
CSDE1-214ENST00000530886 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 CCL4P13236 92 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 IGKV3D-20A0A0C4DH25 116 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 IGHV4-39P01824 125 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 TRACP01848 142 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 CNTFRP26992 372 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 TMEM141Q96I45 108 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 MED13Q9UHV7 2174 aa6.19□□□□□ -1.42
CSDE1-214ENST00000530886 J3QQQ9 107 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 LEPROTO15243 131 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 ZNF784Q8NCA9 323 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-214ENST00000530886 DCANP1Q8TF63 244 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 PEMTQ9UBM1 199 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 ZNF22P17026 224 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-214ENST00000530886 SIT1Q9Y3P8 196 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 ICOSQ9Y6W8 199 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 TRAV26-2A0A0B4J265 109 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 PPP1R17O96001 155 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 TSHBP01222 138 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 Q6ZT83 130 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 C14orf178Q8N769 122 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-214ENST00000530886 SMCR5Q8TEV8 140 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 CFHR4Q92496 578 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 SPRR3Q9UBC9 169 aa6.18□□□□□ -1.42
CSDE1-214ENST00000530886 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 K7EIM0 57 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-214ENST00000530886 MUSTN1Q8IVN3 82 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 TIMM17AQ99595 171 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 COX6CP09669 75 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 ZNF883P0CG24 379 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 Q8TAT8 98 aa6.17□□□□□ -1.42
CSDE1-214ENST00000530886 IGHV3-21A0A0B4J1V1 117 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 OXTP01178 125 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
CSDE1-214ENST00000530886 ZNF876PQ49A33 203 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 RNF7Q9UBF6 113 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 ZNF256Q9Y2P7 627 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-214ENST00000530886 MALP21145 153 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 Q1RN00 199 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 MDS2Q8NDY4 140 aa6.16□□□□□ -1.42
CSDE1-214ENST00000530886 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
CSDE1-214ENST00000530886 C4orf26Q17RF5 130 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 DAND5Q8N907 189 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 MGAQ8IWI9 3026 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 EPM2AB3EWF7 344 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 LYZL6O75951 148 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 KLK15Q9H2R5 256 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 MSRB2Q9Y3D2 182 aa6.15□□□□□ -1.43
CSDE1-214ENST00000530886 IGHV1-18A0A0C4DH31 117 aa6.14□□□□□ -1.43
CSDE1-214ENST00000530886 SMAD5-AS1Q9Y6J3 95 aa6.14□□□□□ -1.43
CSDE1-214ENST00000530886 hADV29S1A0JD25 119 aa6.14□□□□□ -1.43
CSDE1-214ENST00000530886 CCL8P80075 99 aa6.14□□□□□ -1.43
CSDE1-214ENST00000530886 LITAFQ99732 161 aa6.14□□□□□ -1.43
CSDE1-214ENST00000530886 INTS1Q8N201 2190 aaKnown RBP6.14□□□□□ -1.43
CSDE1-214ENST00000530886 TRBV7-1A0A0A6YYK4 115 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 MED14OSP0DP75 135 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 DYNAPQ8N1N2 210 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 DPH3P1Q9H4G8 78 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 IGLV3-9A0A075B6K5 115 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 UBE2E1P51965 193 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
CSDE1-214ENST00000530886 MRPL53Q96EL3 112 aaKnown RBP6.13□□□□□ -1.43
CSDE1-214ENST00000530886 CCL13Q99616 98 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 RNF5Q99942 180 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 JPT2Q9H910 190 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 DYNLRB1Q9NP97 96 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 H7C2G1 150 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 IGHV1-69P01742 117 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 SPANXN1Q5VSR9 72 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 TMEM200BQ69YZ2 307 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 TIMM21Q9BVV7 248 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
CSDE1-214ENST00000530886 IGHV4OR15-8A0A075B7B6 117 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 A0A087WW49 117 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 HRCT1Q6UXD1 115 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 GPHB5Q86YW7 130 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 FAM19A4Q96LR4 140 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 LY6LH3BQJ8 138 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 DLX1P56177 255 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 ADGRG4Q8IZF6 3080 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
CSDE1-214ENST00000530886 MBD3L4A6NDZ8 208 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-214ENST00000530886 MBD3L3A6NE82 208 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-214ENST00000530886 MBD3L5A6NJ08 208 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-214ENST00000530886 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-214ENST00000530886 C3orf36Q3SXR2 165 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms