RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 A0A1B0GV72 72 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 A6NJY4 79 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 DEFB112Q30KQ8 113 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 ADARB2-AS1A8MUL3 147 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 JPT2Q9H910 190 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 KLHL30-AS1Q8NEE0 82 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 MRAP2Q96G30 205 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 YAE1D1Q9NRH1 226 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 MEIG1Q5JSS6 88 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
SCN3B-206ENST00000530277 LAMA5O15230 3695 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 CFHR3Q02985 330 aa9.55□□□□□ -0.88
SCN3B-206ENST00000530277 KLF5Q13887 457 aaPredicted RBP9.55□□□□□ -0.88
SCN3B-206ENST00000530277 COX8AP10176 69 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 CD28P10747 220 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 SEC11AP67812 179 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 NSUN5P1Q3KNT7 163 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 AJUBAQ96IF1 538 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 SPXQ9BT56 116 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 PTPRBP23467 1997 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 TRGV2A0A075B6R0 118 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 A0A1W2PPR1 153 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 SLC25A16P16260 332 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 AGRNO00468 2067 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 C10orf99Q6UWK7 81 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 NPBQ8NG41 125 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
SCN3B-206ENST00000530277 RPL35AP18077 110 aaKnown RBP9.53□□□□□ -0.88
SCN3B-206ENST00000530277 ETDBQ3ZM63 59 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 NDUFS8O00217 210 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 SPATA12Q7Z6I5 190 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 TSSC4Q9Y5U2 329 aaPredicted RBP9.53□□□□□ -0.88
SCN3B-206ENST00000530277 A0A1B0GXF2 115 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 CD5LO43866 347 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 HTN3P15516 51 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 PAX2Q02962 417 aa9.53□□□□□ -0.88
SCN3B-206ENST00000530277 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
SCN3B-206ENST00000530277 USP24Q9UPU5 2620 aa9.52□□□□□ -0.88
SCN3B-206ENST00000530277 SDHAF1A6NFY7 115 aa9.52□□□□□ -0.88
SCN3B-206ENST00000530277 ESDP10768 282 aa9.52□□□□□ -0.88
SCN3B-206ENST00000530277 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.88
SCN3B-206ENST00000530277 WI2-2373I1.2A0A1W2PRP0 233 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 TCTEX1D4Q5JR98 221 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.89
SCN3B-206ENST00000530277 AZU1P20160 251 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 CKS1BP61024 79 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 USMG5Q96IX5 58 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 PGPEP1Q9NXJ5 209 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 ZFHX4Q86UP3 3567 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 H7C1H1 209 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 UBE2L6O14933 153 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
SCN3B-206ENST00000530277 LMO4P61968 165 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 STHQ8IWL8 128 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 C5orf56Q8N8D9 126 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 PRSS47A8MTI9 375 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 HOXA3O43365 443 aaPredicted RBP9.51□□□□□ -0.89
SCN3B-206ENST00000530277 C19orf54Q5BKX5 351 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 Q6ZS46 218 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
SCN3B-206ENST00000530277 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
SCN3B-206ENST00000530277 INS-IGF2F8WCM5 200 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 CRYGBP07316 175 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 Q8N8P6 123 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 SIRPDQ9H106 197 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 RAI1Q7Z5J4 1906 aaPredicted RBP9.5□□□□□ -0.89
SCN3B-206ENST00000530277 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
SCN3B-206ENST00000530277 ADAMTSL5Q6ZMM2 481 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
SCN3B-206ENST00000530277 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 PPP1R17O96001 155 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 IGLV2-11P01706 119 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 RPL13AP40429 203 aaKnown RBP9.49□□□□□ -0.89
SCN3B-206ENST00000530277 H3BMG7 143 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 Q96MF0 132 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
SCN3B-206ENST00000530277 TEX48A0A1B0GUV7 120 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 NDUFA4O00483 81 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 IGHV7-4-1A0A0J9YVY3 117 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 PF4P02776 101 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 MYCNOSP40205 109 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 SLURP1P55000 103 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 CLUHP3Q96NS8 147 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 VCYO14598 125 aa9.48□□□□□ -0.89
SCN3B-206ENST00000530277 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms