RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 GUCA1AP43080 201 aaPredicted RBP1.88□□□□□ -2.11
CAPRIN1-208ENST00000530008 RRAS2P62070 204 aaPredicted RBP1.88□□□□□ -2.11
CAPRIN1-208ENST00000530008 FXYD3Q14802 87 aa1.88□□□□□ -2.11
CAPRIN1-208ENST00000530008 LINC00470Q9BZP3 86 aa1.88□□□□□ -2.11
CAPRIN1-208ENST00000530008 COL6A6A6NMZ7 2263 aa1.88□□□□□ -2.11
CAPRIN1-208ENST00000530008 VIRMAQ69YN4 1812 aaKnown RBP1.87□□□□□ -2.11
CAPRIN1-208ENST00000530008 GNG7O60262 68 aa1.87□□□□□ -2.11
CAPRIN1-208ENST00000530008 LINC01545Q5VT33 79 aa1.87□□□□□ -2.11
CAPRIN1-208ENST00000530008 ADGRB1O14514 1584 aa1.86□□□□□ -2.11
CAPRIN1-208ENST00000530008 CCDC179H3BU77 68 aa1.86□□□□□ -2.11
CAPRIN1-208ENST00000530008 CAV3P56539 151 aa1.86□□□□□ -2.11
CAPRIN1-208ENST00000530008 CCDC167Q9P0B6 97 aa1.86□□□□□ -2.11
CAPRIN1-208ENST00000530008 CDK12Q9NYV4 1490 aaPredicted RBP1.86□□□□□ -2.11
CAPRIN1-208ENST00000530008 IBTKQ9P2D0 1353 aaPredicted RBP1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 EMX2Q04743 252 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 SPCS2Q15005 226 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 KCNRGQ8N5I3 272 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 C5orf56Q8N8D9 126 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 C1orf54Q8WWF1 131 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 LINC00208Q96KT6 92 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 GRIN2AQ12879 1464 aa1.85□□□□□ -2.11
CAPRIN1-208ENST00000530008 TRPM7Q96QT4 1865 aa1.84□□□□□ -2.11
CAPRIN1-208ENST00000530008 Q6ZS92 163 aa1.84□□□□□ -2.11
CAPRIN1-208ENST00000530008 NDUFA12Q9UI09 145 aa1.84□□□□□ -2.11
CAPRIN1-208ENST00000530008 TMEM2Q9UHN6 1383 aa1.84□□□□□ -2.12
CAPRIN1-208ENST00000530008 MYOM3Q5VTT5 1437 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 A0A1W2PPM0 123 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 PIRTP0C851 137 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 RPL13AP3Q6NVV1 102 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 DPH3Q96FX2 82 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 EML5Q05BV3 1969 aa1.83□□□□□ -2.12
CAPRIN1-208ENST00000530008 FAM25AB3EWG3 89 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 FAM25CB3EWG5 89 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 FAM25GB3EWG6 89 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 APOC1P02654 83 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 SPANXN1Q5VSR9 72 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 NDUFA11Q86Y39 141 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 CASZ1Q86V15 1759 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 PTPRMP28827 1452 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 OTOGLQ3ZCN5 2332 aa1.82□□□□□ -2.12
CAPRIN1-208ENST00000530008 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
CAPRIN1-208ENST00000530008 TRAV12-2A0A075B6T6 113 aa1.81□□□□□ -2.12
CAPRIN1-208ENST00000530008 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
CAPRIN1-208ENST00000530008 TEX49A0A1B0GTD5 131 aa1.8□□□□□ -2.12
CAPRIN1-208ENST00000530008 OR2T2Q6IF00 324 aa1.8□□□□□ -2.12
CAPRIN1-208ENST00000530008 TRIOBPQ9H2D6 2365 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 IL5P05113 134 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 ZNF56Q15929 161 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 C10orf99Q6UWK7 81 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 TSKUQ8WUA8 353 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 TMEM242Q9NWH2 141 aa1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 SNRNP200O75643 2136 aaKnown RBP1.79□□□□□ -2.12
CAPRIN1-208ENST00000530008 ZGRF1Q86YA3 2104 aa1.78□□□□□ -2.12
CAPRIN1-208ENST00000530008 FXYD1O00168 92 aa1.78□□□□□ -2.12
CAPRIN1-208ENST00000530008 TMEM141Q96I45 108 aa1.78□□□□□ -2.12
CAPRIN1-208ENST00000530008 PDCD10Q9BUL8 212 aa1.78□□□□□ -2.12
CAPRIN1-208ENST00000530008 SLC48A1Q6P1K1 146 aa1.77□□□□□ -2.13
CAPRIN1-208ENST00000530008 SPTSSAQ969W0 71 aa1.77□□□□□ -2.13
CAPRIN1-208ENST00000530008 ROS1P08922 2347 aa1.77□□□□□ -2.13
CAPRIN1-208ENST00000530008 BLMP54132 1417 aaPredicted RBP1.76□□□□□ -2.13
CAPRIN1-208ENST00000530008 TCRBV3S1A0A5B6 114 aa1.76□□□□□ -2.13
CAPRIN1-208ENST00000530008 FAM92AA1XBS5 289 aa1.76□□□□□ -2.13
CAPRIN1-208ENST00000530008 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
CAPRIN1-208ENST00000530008 CITO14578 2027 aa1.75□□□□□ -2.13
CAPRIN1-208ENST00000530008 K7EIL1 84 aa1.75□□□□□ -2.13
CAPRIN1-208ENST00000530008 PIPP12273 146 aaPredicted RBP1.75□□□□□ -2.13
CAPRIN1-208ENST00000530008 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CAPRIN1-208ENST00000530008 HELZ2Q9BYK8 2649 aaKnown RBP1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 A0A1B0GV90 55 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 NDUFB6O95139 128 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 HIST1H1DP16402 221 aaKnown RBP1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 NPC2P61916 151 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 KLKP1Q107X0 134 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 C9orf116Q5BN46 136 aaPredicted RBP1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 CYP2G1PQ6ZSU1 146 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 SEC11CQ9BY50 192 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 CNTRLQ7Z7A1 2325 aa1.74□□□□□ -2.13
CAPRIN1-208ENST00000530008 ROCK2O75116 1388 aaKnown RBP1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 NINQ8N4C6 2090 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 ASCC3Q8N3C0 2202 aaKnown RBP1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 SNCGO76070 127 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 APODP05090 189 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 MEIG1Q5JSS6 88 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 RPL7L1Q6DKI1 246 aaKnown RBP1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 COPS9Q8WXC6 57 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 SNRNP25Q9BV90 132 aaKnown RBP1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 MYH13Q9UKX3 1938 aa1.73□□□□□ -2.13
CAPRIN1-208ENST00000530008 UBE2G1P62253 170 aa1.72□□□□□ -2.13
CAPRIN1-208ENST00000530008 AGPAT4-IT1Q9H0P7 198 aa1.72□□□□□ -2.13
CAPRIN1-208ENST00000530008 RREB1Q92766 1687 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 A6NIN4 97 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 DLEU1O43261 78 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 RPRMQ9NS64 109 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 PLXNA2O75051 1894 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 MED12Q93074 2177 aa1.71□□□□□ -2.14
CAPRIN1-208ENST00000530008 LAMA4Q16363 1823 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 DLEC1Q9Y238 1755 aa1.7□□□□□ -2.14
CAPRIN1-208ENST00000530008 SPINT3P49223 89 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms