RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 IGKV3D-20A0A0C4DH25 116 aa13.5□□□□□ -0.25
SF3B2-207ENST00000529577 GCGP01275 180 aa13.5□□□□□ -0.25
SF3B2-207ENST00000529577 LINC01620Q4KN68 170 aa13.5□□□□□ -0.25
SF3B2-207ENST00000529577 FAM74A1Q5RGS3 127 aa13.5□□□□□ -0.25
SF3B2-207ENST00000529577 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
SF3B2-207ENST00000529577 ATP6V0E2Q8NHE4 81 aa13.5□□□□□ -0.25
SF3B2-207ENST00000529577 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
SF3B2-207ENST00000529577 A0A1W2PPV4 95 aa13.49□□□□□ -0.25
SF3B2-207ENST00000529577 LINC00479Q96M42 142 aa13.49□□□□□ -0.25
SF3B2-207ENST00000529577 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
SF3B2-207ENST00000529577 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
SF3B2-207ENST00000529577 PARLQ9H300 379 aa13.49□□□□□ -0.25
SF3B2-207ENST00000529577 GCHFRP30047 84 aa13.48□□□□□ -0.25
SF3B2-207ENST00000529577 RAB24Q969Q5 203 aa13.48□□□□□ -0.25
SF3B2-207ENST00000529577 SSNA1O43805 119 aa13.47□□□□□ -0.25
SF3B2-207ENST00000529577 C1QBP02746 253 aa13.47□□□□□ -0.25
SF3B2-207ENST00000529577 CDC34P49427 236 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-207ENST00000529577 LAGE3Q14657 143 aa13.47□□□□□ -0.25
SF3B2-207ENST00000529577 C14orf178Q8N769 122 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-207ENST00000529577 C5orf17Q8NAS9 161 aa13.47□□□□□ -0.25
SF3B2-207ENST00000529577 GAGE12JA6NER3 117 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 TAAR5O14804 337 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 GAGE1Q13065 139 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 GAGE4Q13068 117 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 GAGE5Q13069 117 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 GAGE13Q4V321 117 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 OR2G3Q8NGZ4 309 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 SH3BGRL3Q9H299 93 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 EPDR1Q9UM22 224 aa13.46□□□□□ -0.25
SF3B2-207ENST00000529577 CIDEAO60543 219 aa13.45□□□□□ -0.26
SF3B2-207ENST00000529577 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
SF3B2-207ENST00000529577 SUMO1P63165 101 aaKnown RBP13.45□□□□□ -0.26
SF3B2-207ENST00000529577 FLI1Q01543 452 aaPredicted RBP13.45□□□□□ -0.26
SF3B2-207ENST00000529577 LINC00528Q8N1L1 170 aa13.45□□□□□ -0.26
SF3B2-207ENST00000529577 HSD17B11Q8NBQ5 300 aa13.45□□□□□ -0.26
SF3B2-207ENST00000529577 UBR4Q5T4S7 5183 aa13.45□□□□□ -0.26
SF3B2-207ENST00000529577 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.44□□□□□ -0.26
SF3B2-207ENST00000529577 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 PET100P0DJ07 73 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 ATP6V0CP27449 155 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 CRIP1P50238 77 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 Q5BKY6 102 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 BAALCQ8WXS3 180 aa13.44□□□□□ -0.26
SF3B2-207ENST00000529577 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 A6NHS1 94 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 KRTAP29-1A8MX34 341 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-207ENST00000529577 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 SMUG1Q53HV7 270 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 OR2T35Q8NGX2 323 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
SF3B2-207ENST00000529577 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
SF3B2-207ENST00000529577 J3QL48 77 aa13.41□□□□□ -0.26
SF3B2-207ENST00000529577 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
SF3B2-207ENST00000529577 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
SF3B2-207ENST00000529577 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
SF3B2-207ENST00000529577 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
SF3B2-207ENST00000529577 ALG5Q9Y673 324 aa13.4□□□□□ -0.26
SF3B2-207ENST00000529577 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
SF3B2-207ENST00000529577 AQP10Q96PS8 301 aa13.39□□□□□ -0.27
SF3B2-207ENST00000529577 TM2D2Q9BX73 214 aa13.39□□□□□ -0.27
SF3B2-207ENST00000529577 RNF222A6NCQ9 220 aa13.37□□□□□ -0.27
SF3B2-207ENST00000529577 A8MWV9 139 aa13.37□□□□□ -0.27
SF3B2-207ENST00000529577 LGALSLQ3ZCW2 172 aaPredicted RBP13.37□□□□□ -0.27
SF3B2-207ENST00000529577 PIK3CD-AS1Q5SR53 167 aa13.37□□□□□ -0.27
SF3B2-207ENST00000529577 NIT1Q86X76 327 aa13.37□□□□□ -0.27
SF3B2-207ENST00000529577 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
SF3B2-207ENST00000529577 TRAV8-3A0A0A6YYJ7 113 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 H3BVH4 76 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 CXorf1O96002 111 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 Q86TA4 180 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 ZC2HC1AQ96GY0 325 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
SF3B2-207ENST00000529577 GRIFINA4D1Z8 144 aa13.35□□□□□ -0.27
SF3B2-207ENST00000529577 PLA2G1BP04054 148 aaKnown RBP13.35□□□□□ -0.27
SF3B2-207ENST00000529577 SAPCD1Q5SSQ6 148 aa13.35□□□□□ -0.27
SF3B2-207ENST00000529577 DNLZQ5SXM8 178 aa13.35□□□□□ -0.27
SF3B2-207ENST00000529577 A0A1W2PRE2 83 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 FABP5P3A8MUU1 101 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 K7EQM0 130 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 ARMS2P0C7Q2 107 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 ASIPP42127 132 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 SERF2P84101 59 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
SF3B2-207ENST00000529577 CIRBP-AS1Q8TBR5 109 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 TNFSF18Q9UNG2 199 aa13.34□□□□□ -0.27
SF3B2-207ENST00000529577 A0A087WWL8 130 aa13.33□□□□□ -0.28
SF3B2-207ENST00000529577 M0R036 132 aa13.33□□□□□ -0.28
SF3B2-207ENST00000529577 UBE2G2P60604 165 aa13.33□□□□□ -0.28
SF3B2-207ENST00000529577 COX8CQ7Z4L0 72 aa13.33□□□□□ -0.28
SF3B2-207ENST00000529577 ACTR3CQ9C0K3 210 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-207ENST00000529577 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
SF3B2-207ENST00000529577 B4DEV8 164 aa13.32□□□□□ -0.28
SF3B2-207ENST00000529577 PEX7O00628 323 aa13.32□□□□□ -0.28
SF3B2-207ENST00000529577 SH2D1AO60880 128 aa13.32□□□□□ -0.28
SF3B2-207ENST00000529577 S100A4P26447 101 aaKnown RBP13.32□□□□□ -0.28
SF3B2-207ENST00000529577 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms