RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 ICOSQ9Y6W8 199 aa11.63□□□□□ -0.55
HIF3A-211ENST00000528563 M0R036 132 aa11.62□□□□□ -0.55
HIF3A-211ENST00000528563 S100A4P26447 101 aaKnown RBP11.62□□□□□ -0.55
HIF3A-211ENST00000528563 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
HIF3A-211ENST00000528563 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
HIF3A-211ENST00000528563 ZNF506Q5JVG8 444 aa11.62□□□□□ -0.55
HIF3A-211ENST00000528563 PIK3CD-AS1Q5SR53 167 aa11.62□□□□□ -0.55
HIF3A-211ENST00000528563 UPK3BQ9BT76 320 aa11.62□□□□□ -0.55
HIF3A-211ENST00000528563 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
HIF3A-211ENST00000528563 CIDEAO60543 219 aa11.61□□□□□ -0.55
HIF3A-211ENST00000528563 RPL35P42766 123 aaKnown RBP11.61□□□□□ -0.55
HIF3A-211ENST00000528563 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
HIF3A-211ENST00000528563 ALKAL2Q6UX46 152 aa11.61□□□□□ -0.55
HIF3A-211ENST00000528563 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
HIF3A-211ENST00000528563 Q9H8V8 135 aa11.61□□□□□ -0.55
HIF3A-211ENST00000528563 MRPS16Q9Y3D3 137 aaKnown RBP11.61□□□□□ -0.55
HIF3A-211ENST00000528563 GRIFINA4D1Z8 144 aa11.6□□□□□ -0.55
HIF3A-211ENST00000528563 RTL8CO15255 209 aa11.6□□□□□ -0.55
HIF3A-211ENST00000528563 GATA1P15976 413 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-211ENST00000528563 BOLA1Q9Y3E2 137 aa11.6□□□□□ -0.55
HIF3A-211ENST00000528563 NBDYA0A0U1RRE5 68 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 K7EQD1 137 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 ARMS2P0C7Q2 107 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 BCL2P10415 239 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 GYPEP15421 78 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 FRAS1Q86XX4 4008 aa11.59□□□□□ -0.55
HIF3A-211ENST00000528563 PDE6DO43924 150 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 IFNA1P01562 189 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 BLOC1S1P78537 153 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 LINC00336Q6ZUF6 198 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 VAX2Q9UIW0 290 aa11.58□□□□□ -0.56
HIF3A-211ENST00000528563 TMSB15BA0A087X1C1 80 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 H3BVH4 76 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 TAGLN2P37802 199 aaKnown RBP11.57□□□□□ -0.56
HIF3A-211ENST00000528563 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 RAB19A4D1S5 217 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 A8MWV9 139 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 SLC25A29Q8N8R3 303 aa11.57□□□□□ -0.56
HIF3A-211ENST00000528563 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 LOC100131303A0A0U1RQF7 123 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 TRBV6-4A0A1B0GX49 114 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 SRIP30626 198 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 UFSP1Q6NVU6 142 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 PARLQ9H300 379 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 JPT2Q9H910 190 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
HIF3A-211ENST00000528563 RPL19P84098 196 aaKnown RBP11.55□□□□□ -0.56
HIF3A-211ENST00000528563 Q6ZSN1 163 aa11.55□□□□□ -0.56
HIF3A-211ENST00000528563 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
HIF3A-211ENST00000528563 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 CXCL1P09341 107 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
HIF3A-211ENST00000528563 PRR27Q6MZM9 219 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
HIF3A-211ENST00000528563 NXPH4O95158 308 aa11.53□□□□□ -0.56
HIF3A-211ENST00000528563 MED14OSP0DP75 135 aa11.53□□□□□ -0.56
HIF3A-211ENST00000528563 GNG4P50150 75 aa11.53□□□□□ -0.56
HIF3A-211ENST00000528563 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
HIF3A-211ENST00000528563 SSBP4Q9BWG4 385 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-211ENST00000528563 KRTAP1-5Q9BYS1 174 aa11.53□□□□□ -0.56
HIF3A-211ENST00000528563 A0A1W2PPQ1 181 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 SIVA1O15304 175 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 RHOHQ15669 191 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 SFRP2Q96HF1 295 aa11.52□□□□□ -0.56
HIF3A-211ENST00000528563 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 CRYGDP07320 174 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 M0R381 172 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 SNAI2O43623 268 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 TIRAPP58753 221 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 C6orf223Q8N319 242 aa11.51□□□□□ -0.57
HIF3A-211ENST00000528563 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
HIF3A-211ENST00000528563 BIRC6Q9NR09 4857 aa11.5□□□□□ -0.57
HIF3A-211ENST00000528563 OR10AG1Q8NH19 301 aa11.5□□□□□ -0.57
HIF3A-211ENST00000528563 Q9UF83 564 aa11.5□□□□□ -0.57
HIF3A-211ENST00000528563 A0A087WWL8 130 aa11.49□□□□□ -0.57
HIF3A-211ENST00000528563 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
HIF3A-211ENST00000528563 RHODO00212 210 aa11.49□□□□□ -0.57
HIF3A-211ENST00000528563 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
HIF3A-211ENST00000528563 C14orf178Q8N769 122 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-211ENST00000528563 BIN3Q9NQY0 253 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms