RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RPL35P42766 123 aaKnown RBP9.84□□□□□ -0.83
CAPN1-212ENST00000527887 TMEM183BQ1AE95 376 aa9.84□□□□□ -0.83
CAPN1-212ENST00000527887 ESRGQ1W209 222 aa9.84□□□□□ -0.83
CAPN1-212ENST00000527887 FMC1Q96HJ9 113 aa9.84□□□□□ -0.83
CAPN1-212ENST00000527887 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
CAPN1-212ENST00000527887 MRPS16Q9Y3D3 137 aaKnown RBP9.84□□□□□ -0.83
CAPN1-212ENST00000527887 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 M0R036 132 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 AKR1C3P42330 323 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 TNP2Q05952 138 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 LINC01551Q86U37 167 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
CAPN1-212ENST00000527887 TRBV20OR9-2A0A075B6H5 130 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 A0A096LPF7 62 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 GNG4P50150 75 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 RPL23P62829 140 aaKnown RBP9.82□□□□□ -0.84
CAPN1-212ENST00000527887 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 ZFP30Q9Y2G7 519 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 PCLOQ9Y6V0 5065 aa9.82□□□□□ -0.84
CAPN1-212ENST00000527887 DIRC3C9JPN6 131 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 UBE2G1P62253 170 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 ZNF415Q09FC8 603 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 PRR9Q5T870 116 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 ATRAIDQ6UW56 229 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 ANAPC16Q96DE5 110 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 SMCO4Q9NRQ5 59 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 PRO0255Q9UI72 69 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 TP53TG3Q9ULZ0 132 aa9.81□□□□□ -0.84
CAPN1-212ENST00000527887 PAX4O43316 350 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 Q6AWC8 147 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 SPXQ9BT56 116 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 MLST8Q9BVC4 326 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 RPS10P5Q9NQ39 176 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
CAPN1-212ENST00000527887 RYR1P21817 5038 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 C16orf90A8MZG2 172 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 LTAP01374 205 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 ADIRFQ15847 76 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 CENPWQ5EE01 88 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 ZNF575Q86XF7 245 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 Q8TAT8 98 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
CAPN1-212ENST00000527887 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 GCGP01275 180 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 IGLV2-8P01709 118 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 MRPL23Q16540 153 aaKnown RBP9.78□□□□□ -0.84
CAPN1-212ENST00000527887 TDRG1Q3Y452 100 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 SAPCD1Q5SSQ6 148 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 GOLT1AQ6ZVE7 132 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 RASL10AQ92737 203 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
CAPN1-212ENST00000527887 CDK2AP2O75956 126 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 CRYBA4P53673 196 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 GNG5P63218 68 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 FLI1Q01543 452 aaPredicted RBP9.77□□□□□ -0.85
CAPN1-212ENST00000527887 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 TMEM183AQ8IXX5 376 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 SFRP2Q96HF1 295 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 LINC00479Q96M42 142 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
CAPN1-212ENST00000527887 MRPL16Q9NX20 251 aaKnown RBP9.77□□□□□ -0.85
CAPN1-212ENST00000527887 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 K7EP13 123 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 SIVA1O15304 175 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 FHL2Q14192 279 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 Q6ZQT7 251 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 BTF3L4Q96K17 158 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 KRTAP1-5Q9BYS1 174 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 MDFICQ9P1T7 246 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 PSG8Q9UQ74 426 aa9.76□□□□□ -0.85
CAPN1-212ENST00000527887 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 K7EN84 100 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 ORM1P02763 201 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 MUC21Q5SSG8 566 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 Q86TA4 180 aa9.75□□□□□ -0.85
CAPN1-212ENST00000527887 TRAV9-1A0A075B6T8 112 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 TRAV34A0A0B4J273 112 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 SCO1O75880 301 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 IGHV3-53P01767 116 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 C8orf49Q96NF6 230 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 MUC4Q99102 2169 aa9.74□□□□□ -0.85
CAPN1-212ENST00000527887 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms