RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 MBD3L1Q8WWY6 194 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 TNFRSF18Q9Y5U5 241 aa9.16□□□□□ -0.94
USH1C-203ENST00000526181 UMAD1C9J7I0 102 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 PFDN1O60925 122 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 ASIPP42127 132 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 TXNDC17Q9BRA2 123 aa9.15□□□□□ -0.94
USH1C-203ENST00000526181 MUC4Q99102 2169 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 B4DEV8 164 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 KRBOX1C9JBD0 128 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 H3BVH4 76 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 LTAP01374 205 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
USH1C-203ENST00000526181 AKR1C3P42330 323 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
USH1C-203ENST00000526181 COX8CQ7Z4L0 72 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 PTH2Q96A98 100 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 TCEAL7Q9BRU2 100 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 JPT2Q9H910 190 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 ZFP30Q9Y2G7 519 aa9.14□□□□□ -0.95
USH1C-203ENST00000526181 RYR1P21817 5038 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 TRBV6-1A0A0K0K1D8 114 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 SCO2A0A1W2PP80 73 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 TPT1P13693 172 aaKnown RBP9.13□□□□□ -0.95
USH1C-203ENST00000526181 FAM162BQ5T6X4 162 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 Q6ZSN1 163 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 SPATA12Q7Z6I5 190 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 PARLQ9H300 379 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
USH1C-203ENST00000526181 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 EIF5AP63241 154 aaKnown RBP9.12□□□□□ -0.95
USH1C-203ENST00000526181 CCL20P78556 96 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 RHOHQ15669 191 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 ZNF674Q2M3X9 581 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
USH1C-203ENST00000526181 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 IL36BQ9NZH7 164 aa9.12□□□□□ -0.95
USH1C-203ENST00000526181 CIDEAO60543 219 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
USH1C-203ENST00000526181 KRTAP10-2P60368 255 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
USH1C-203ENST00000526181 A8MWV9 139 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 MGST1P10620 155 aaKnown RBP9.1□□□□□ -0.95
USH1C-203ENST00000526181 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 DNLZQ5SXM8 178 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 TCTE3Q8IZS6 198 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 Q9UF83 564 aa9.1□□□□□ -0.95
USH1C-203ENST00000526181 TIRAPP58753 221 aa9.09□□□□□ -0.95
USH1C-203ENST00000526181 ZFP2Q6ZN57 461 aa9.09□□□□□ -0.95
USH1C-203ENST00000526181 GNG13Q9P2W3 67 aa9.09□□□□□ -0.95
USH1C-203ENST00000526181 TRAV9-2A0A087WT02 112 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 GAGE12JA6NER3 117 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 M0R381 172 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 EVI2AP22794 236 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 FUSP35637 526 aaKnown RBP eCLIP9.08□□□□□ -0.96
USH1C-203ENST00000526181 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
USH1C-203ENST00000526181 GAGE1Q13065 139 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 GAGE4Q13068 117 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 GAGE5Q13069 117 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 GAGE13Q4V321 117 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 C14orf178Q8N769 122 aaPredicted RBP9.08□□□□□ -0.96
USH1C-203ENST00000526181 DERL1Q9BUN8 251 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 SCRT2Q9NQ03 307 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 MSRB1Q9NZV6 116 aa9.08□□□□□ -0.96
USH1C-203ENST00000526181 A0A087WWL8 130 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 IGHV3-38A0A0C4DH36 116 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
USH1C-203ENST00000526181 CRYGDP07320 174 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 LINC00694P0DN24 101 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 ATP6V0E2Q8NHE4 81 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 PHLDA3Q9Y5J5 127 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 ABCA13Q86UQ4 5058 aa9.07□□□□□ -0.96
USH1C-203ENST00000526181 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 IGHV3-30P01768 117 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 IGHV3-33P01772 117 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 C1QBP02746 253 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 IGHV3-30-3P0DP02 117 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 IGHV3-30-5P0DP03 117 aa9.06□□□□□ -0.96
USH1C-203ENST00000526181 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms