RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 SH2D1AO60880 128 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 GAGE7O76087 117 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 APOC3P02656 99 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 ATP5G1P05496 136 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 GAGE12FP0CL80 117 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 GAGE12GP0CL81 117 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 GAGE12IP0CL82 117 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 HTN3P15516 51 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 GNG4P50150 75 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 LGALS9BQ3B8N2 356 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 CENPWQ5EE01 88 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 Q6ZTI0 123 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 SMIM12Q96EX1 92 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 DERL1Q9BUN8 251 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 C11orf21Q9P2W6 132 aa7.15□□□□□ -1.26
VPS28-204ENST00000526054 TRGV2A0A075B6R0 118 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 B4DEV8 164 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 C9JCJ5 164 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 RTL8CO15255 209 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 GNRH2O43555 120 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 ORM1P02763 201 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 PNRC1Q12796 327 aaPredicted RBP7.14□□□□□ -1.27
VPS28-204ENST00000526054 TMEM241Q24JQ0 296 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 SVBPQ8N300 66 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 FAM210BQ96KR6 192 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 BIN3Q9NQY0 253 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 MRPL16Q9NX20 251 aaKnown RBP7.14□□□□□ -1.27
VPS28-204ENST00000526054 NAT8Q9UHE5 227 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 PKD1P98161 4303 aa7.14□□□□□ -1.27
VPS28-204ENST00000526054 IGLV2-18A0A075B6J9 118 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 F5H768 121 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 M0R036 132 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 M0R2P5 195 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 MGST1P10620 155 aaKnown RBP7.13□□□□□ -1.27
VPS28-204ENST00000526054 S100A4P26447 101 aaKnown RBP7.13□□□□□ -1.27
VPS28-204ENST00000526054 ASIPP42127 132 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 CRIP1P50238 77 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 LINC01559Q495D7 138 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 PRR27Q6MZM9 219 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 C18orf15Q96N68 181 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 ABCA13Q86UQ4 5058 aa7.13□□□□□ -1.27
VPS28-204ENST00000526054 SNAPINO95295 136 aa7.12□□□□□ -1.27
VPS28-204ENST00000526054 OR5I1Q13606 314 aa7.12□□□□□ -1.27
VPS28-204ENST00000526054 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
VPS28-204ENST00000526054 LY96Q9Y6Y9 160 aa7.12□□□□□ -1.27
VPS28-204ENST00000526054 TRBV20OR9-2A0A075B6H5 130 aa7.11□□□□□ -1.27
VPS28-204ENST00000526054 ADIRFQ15847 76 aa7.11□□□□□ -1.27
VPS28-204ENST00000526054 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
VPS28-204ENST00000526054 RASL10AQ92737 203 aa7.11□□□□□ -1.27
VPS28-204ENST00000526054 DAZAP1Q96EP5 407 aaKnown RBP7.11□□□□□ -1.27
VPS28-204ENST00000526054 NACAE9PAV3 2078 aa7.11□□□□□ -1.27
VPS28-204ENST00000526054 TMSB15BA0A087X1C1 80 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 H3BVH4 76 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 IGLV2-8P01709 118 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 CXCL1P09341 107 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
VPS28-204ENST00000526054 RPL23P62829 140 aaKnown RBP7.1□□□□□ -1.27
VPS28-204ENST00000526054 RHEBQ15382 184 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 RNF212Q495C1 297 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 DNLZQ5SXM8 178 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 TMEM88Q6PEY1 159 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 Q6ZR54 194 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 C15orf53Q8NAA6 179 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 PTH2Q96A98 100 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
VPS28-204ENST00000526054 HSPG2P98160 4391 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 P01737 135 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 IGHV3-53P01767 116 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 RPS20P60866 119 aaKnown RBP7.09□□□□□ -1.27
VPS28-204ENST00000526054 ZNF876PQ49A33 203 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 SYT8Q8NBV8 401 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 OR4C5Q8NGB2 326 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 OCC1Q8TAD7 63 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 PHLDA3Q9Y5J5 127 aa7.09□□□□□ -1.27
VPS28-204ENST00000526054 TRGV4A0A0C4DH28 118 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 XKRY2A2RUG3 117 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 MT-ND4LP03901 98 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 ARMS2P0C7Q2 107 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 HOXA5P20719 270 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 RPL19P84098 196 aaKnown RBP7.08□□□□□ -1.28
VPS28-204ENST00000526054 SLAQ13239 276 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 PIK3CD-AS1Q5SR53 167 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 OR2D3Q8NGH3 330 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 ISOC2Q96AB3 205 aa7.08□□□□□ -1.28
VPS28-204ENST00000526054 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 C7orf77A4D0Y5 90 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 K7EN84 100 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 PPP1R2P9O14990 202 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 CIDEAO60543 219 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 C1orf134Q5TEV5 83 aa7.07□□□□□ -1.28
VPS28-204ENST00000526054 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms