RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 CT83Q5H943 113 aa13.29□□□□□ -0.28
PTPRK-218ENST00000525459 PHLDA1Q8WV24 401 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-218ENST00000525459 GRIFINA4D1Z8 144 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 ARMS2P0C7Q2 107 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 ADIRFQ15847 76 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 C15orf54Q8N8G6 183 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 SYT8Q8NBV8 401 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 RNASE7Q9H1E1 156 aaKnown RBP13.28□□□□□ -0.28
PTPRK-218ENST00000525459 OSTCQ9NRP0 149 aa13.28□□□□□ -0.28
PTPRK-218ENST00000525459 MRPL16Q9NX20 251 aaKnown RBP13.28□□□□□ -0.28
PTPRK-218ENST00000525459 OR5AL1P0C617 328 aa13.27□□□□□ -0.28
PTPRK-218ENST00000525459 ISOC2Q96AB3 205 aa13.27□□□□□ -0.28
PTPRK-218ENST00000525459 SCRT2Q9NQ03 307 aa13.27□□□□□ -0.28
PTPRK-218ENST00000525459 PHLDA3Q9Y5J5 127 aa13.27□□□□□ -0.28
PTPRK-218ENST00000525459 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
PTPRK-218ENST00000525459 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
PTPRK-218ENST00000525459 ZNF876PQ49A33 203 aa13.27□□□□□ -0.29
PTPRK-218ENST00000525459 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-218ENST00000525459 DEFB131BA0A096LNP1 70 aa13.26□□□□□ -0.29
PTPRK-218ENST00000525459 SNAI2O43623 268 aa13.26□□□□□ -0.29
PTPRK-218ENST00000525459 CIDEAO60543 219 aa13.26□□□□□ -0.29
PTPRK-218ENST00000525459 ZNF575Q86XF7 245 aa13.26□□□□□ -0.29
PTPRK-218ENST00000525459 ZFP82Q8N141 532 aa13.26□□□□□ -0.29
PTPRK-218ENST00000525459 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-218ENST00000525459 TMEM218A2RU14 115 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 A8MWL6 223 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 CEMP1Q6PRD7 247 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-218ENST00000525459 SFRP2Q96HF1 295 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 FAM210BQ96KR6 192 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 NACAE9PAV3 2078 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 F2Z2F3 143 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 SEC11CQ9BY50 192 aa13.25□□□□□ -0.29
PTPRK-218ENST00000525459 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
PTPRK-218ENST00000525459 FAM231BA6NCW3 169 aa13.23□□□□□ -0.29
PTPRK-218ENST00000525459 A8MWV9 139 aa13.23□□□□□ -0.29
PTPRK-218ENST00000525459 F8W036 122 aa13.23□□□□□ -0.29
PTPRK-218ENST00000525459 TCTAP57738 103 aa13.23□□□□□ -0.29
PTPRK-218ENST00000525459 GFRA4Q9GZZ7 299 aa13.23□□□□□ -0.29
PTPRK-218ENST00000525459 NXPH4O95158 308 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 HTN3P15516 51 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 CACNG7P62955 275 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 SLAQ13239 276 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 CASC10Q5T4H9 136 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 SPANXN1Q5VSR9 72 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 OR4C5Q8NGB2 326 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 OR10G8Q8NGN5 311 aa13.22□□□□□ -0.29
PTPRK-218ENST00000525459 CTRLP40313 264 aa13.21□□□□□ -0.3
PTPRK-218ENST00000525459 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.3
PTPRK-218ENST00000525459 TSKUQ8WUA8 353 aa13.21□□□□□ -0.3
PTPRK-218ENST00000525459 F5H768 121 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 M0R381 172 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 PPP1R2P9O14990 202 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 GZMBP10144 247 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 V9GYV3 84 aa13.2□□□□□ -0.3
PTPRK-218ENST00000525459 RHODO00212 210 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 RS1O15537 224 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 ADCYAP1P18509 176 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 WDR73Q6P4I2 378 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 TPPP3Q9BW30 176 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 FOXA3P55318 350 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-218ENST00000525459 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 ZFP2Q6ZN57 461 aa13.19□□□□□ -0.3
PTPRK-218ENST00000525459 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
PTPRK-218ENST00000525459 H3BNG1 76 aa13.18□□□□□ -0.3
PTPRK-218ENST00000525459 CFAP126Q5VTH2 177 aa13.18□□□□□ -0.3
PTPRK-218ENST00000525459 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
PTPRK-218ENST00000525459 IGHV4-4A0A075B6R2 117 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 TRGV4A0A0C4DH28 118 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 NDUFA5Q16718 116 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 C10orf91Q5T1B1 145 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 BORCS7Q96B45 105 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 ANAPC16Q96DE5 110 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 ZNF479Q96JC4 524 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
PTPRK-218ENST00000525459 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
PTPRK-218ENST00000525459 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 HOXA5P20719 270 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 IGLL5B9A064 214 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 TRGC1P0CF51 173 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
PTPRK-218ENST00000525459 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
PTPRK-218ENST00000525459 FHL2Q14192 279 aa13.15□□□□□ -0.3
PTPRK-218ENST00000525459 TMEM88Q6PEY1 159 aa13.14□□□□□ -0.31
PTPRK-218ENST00000525459 SMIM17P0DL12 118 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 RNF212Q495C1 297 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 SMIM27A0A1W2PRY6 76 aa13.13□□□□□ -0.31
PTPRK-218ENST00000525459 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
PTPRK-218ENST00000525459 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms