RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PRB4P10163 310 aaPredicted RBP2.17□□□□□ -2.06
USP47-206ENST00000525367 C9orf153Q5TBE3 101 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 NDUFA11Q86Y39 141 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 LSM10Q969L4 123 aaKnown RBP2.17□□□□□ -2.06
USP47-206ENST00000525367 LIMD2Q9BT23 127 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 CYSTM1Q9H1C7 97 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 FOCADQ5VW36 1801 aa2.17□□□□□ -2.06
USP47-206ENST00000525367 BAZ2BQ9UIF8 2168 aaKnown RBP2.16□□□□□ -2.06
USP47-206ENST00000525367 STRCP1A6NGW2 1772 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 KIDINS220Q9ULH0 1771 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 TRBV6-7A0A0A0MS04 114 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 IGKV3OR2-268A0A0C4DH90 116 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 TRBV10-1A0A0K0K1A3 114 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 NUPR2A6NF83 97 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 HCRTO43612 131 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 SPATA45Q537H7 98 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 GDF5OSQ5U4N7 250 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 SLC48A1Q6P1K1 146 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 Q6ZS92 163 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 MRPL57Q9BQC6 102 aaKnown RBP2.16□□□□□ -2.06
USP47-206ENST00000525367 COL5A1P20908 1838 aaPredicted RBP2.16□□□□□ -2.06
USP47-206ENST00000525367 DAPK1P53355 1430 aa2.16□□□□□ -2.06
USP47-206ENST00000525367 MUC4Q99102 2169 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.15□□□□□ -2.07
USP47-206ENST00000525367 CXorf51AA0A1B0GTR3 108 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 PDE6GP18545 87 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 CBLN1P23435 193 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 NPC2P61916 151 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 PCOTHQ58A44 107 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 SPRNQ5BIV9 151 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
USP47-206ENST00000525367 UNQ6190/PRO20217Q6UXQ8 127 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 ACBD7Q8N6N7 88 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
USP47-206ENST00000525367 MED12LQ86YW9 2145 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 ALPK2Q86TB3 2170 aa2.15□□□□□ -2.07
USP47-206ENST00000525367 TRAV30A0A087WSZ9 112 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 IGLV3-1P01715 115 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 IFITM1P13164 125 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 IL9P15248 144 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 UBE2G1P62253 170 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 HSD52Q0P140 79 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 S100A7L2Q5SY68 101 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 LINC00526Q96FQ7 95 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 C22orf24Q9Y442 160 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 FREM1Q5H8C1 2179 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 DOCK10Q96BY6 2186 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 MYH7P12883 1935 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 MYH13Q9UKX3 1938 aa2.14□□□□□ -2.07
USP47-206ENST00000525367 MYH6P13533 1939 aa2.13□□□□□ -2.07
USP47-206ENST00000525367 TCRBV3S1A0A5B6 114 aa2.13□□□□□ -2.07
USP47-206ENST00000525367 IFNA17P01571 189 aa2.13□□□□□ -2.07
USP47-206ENST00000525367 COL5A3P25940 1745 aaPredicted RBP2.13□□□□□ -2.07
USP47-206ENST00000525367 PZPP20742 1482 aa2.13□□□□□ -2.07
USP47-206ENST00000525367 CACNA1GO43497 2377 aa2.13□□□□□ -2.07
USP47-206ENST00000525367 KIAA1549LQ6ZVL6 1849 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 ADGRB2O60241 1585 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 IGKV3-7A0A075B6H7 116 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 IGKV2-40A0A087WW87 121 aaPredicted RBP2.12□□□□□ -2.07
USP47-206ENST00000525367 FAM24AA6NFZ4 105 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 HIGD1CA8MV81 97 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 IGKV2D-40P01614 121 aaPredicted RBP2.12□□□□□ -2.07
USP47-206ENST00000525367 CCKP06307 115 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 C10orf105Q8TEF2 133 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
USP47-206ENST00000525367 KIF13AQ9H1H9 1805 aa2.12□□□□□ -2.07
USP47-206ENST00000525367 VPS8Q8N3P4 1428 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 LRP5O75197 1615 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 OOSP1A8MZH6 123 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 M0R143 59 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 TFF1P04155 84 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 SPINK8P0C7L1 97 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 KRTAP13-1Q8IUC0 172 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 AQP10Q96PS8 301 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 ODF3Q96PU9 254 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 MAPKBP1O60336 1514 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 CEP192Q8TEP8 1941 aa2.11□□□□□ -2.07
USP47-206ENST00000525367 HEATR1Q9H583 2144 aaKnown RBP2.11□□□□□ -2.07
USP47-206ENST00000525367 CNTLNQ9NXG0 1405 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 PLXNA4Q9HCM2 1894 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 C4orf33Q8N1A6 199 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 Q8N8P6 123 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 SPTSSBQ8NFR3 76 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 IFI27L1Q96BM0 104 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
USP47-206ENST00000525367 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
USP47-206ENST00000525367 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.07
USP47-206ENST00000525367 RBM3P98179 157 aaKnown RBP2.09□□□□□ -2.07
USP47-206ENST00000525367 GBF1Q92538 1859 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 TRAV12-3A0A0B4J271 114 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 TRBV10-3A0A0K0K1G6 114 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 FXYD4P59646 89 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 INSL4Q14641 139 aa2.08□□□□□ -2.08
USP47-206ENST00000525367 OBSCN-AS1Q96MR7 158 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms