RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GAGE12GP0CL81 117 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 GAGE12IP0CL82 117 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 DEFB130BP0DP73 79 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 DEFB130AP0DP74 79 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SSTP61278 116 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 TMEM241Q24JQ0 296 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SOHLH1Q5JUK2 328 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 ZFAND6Q6FIF0 208 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 FAM159AQ6UWV7 190 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 OR2D3Q8NGH3 330 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 ISOC2Q96AB3 205 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SAMD10Q9BYL1 202 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 MSRB1Q9NZV6 116 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 Q9UF83 564 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 V9GYV3 84 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 VPS13DQ5THJ4 4388 aa4.58□□□□□ -1.68
CD44-214ENST00000525211 NACAE9PAV3 2078 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 IGHV3-53P01767 116 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 IGLC6P0CF74 106 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 HOXA5P20719 270 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 FOXA3P55318 350 aaPredicted RBP4.57□□□□□ -1.68
CD44-214ENST00000525211 LINC00310P59036 64 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 DAZ2Q13117 558 aaKnown RBP4.57□□□□□ -1.68
CD44-214ENST00000525211 ADIRFQ15847 76 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 Q6ZSN1 163 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 OR10AG1Q8NH19 301 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 GTSF1Q8WW33 167 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 C16orf74Q96GX8 76 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 SCRT2Q9NQ03 307 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 NAT8Q9UHE5 227 aa4.57□□□□□ -1.68
CD44-214ENST00000525211 TMEM189A5PLL7 270 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 CXorf65A6NEN9 183 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 GATCO43716 136 aaKnown RBP4.56□□□□□ -1.68
CD44-214ENST00000525211 ZNF415Q09FC8 603 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 DNLZQ5SXM8 178 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 C10orf91Q5T1B1 145 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 IBA57Q5T440 356 aaKnown RBP4.56□□□□□ -1.68
CD44-214ENST00000525211 ATRAIDQ6UW56 229 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 C11orf45Q8TAV5 145 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 ZNF479Q96JC4 524 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 SMDT1Q9H4I9 107 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 RPP21Q9H633 154 aaKnown RBP4.56□□□□□ -1.68
CD44-214ENST00000525211 LY96Q9Y6Y9 160 aa4.56□□□□□ -1.68
CD44-214ENST00000525211 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 SNURFLB1AK76 121 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 F8W036 122 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 SNAI2O43623 268 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 P01737 135 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 SPART-AS1P0CW21 52 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 HTN3P15516 51 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 ASIPP42127 132 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 DAD1P61803 113 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 RNF212Q495C1 297 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 LYZL1Q6UWQ5 148 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 FAM231DQ6ZW35 169 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 SFRP2Q96HF1 295 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 KCNS1Q96KK3 526 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 OSTCQ9NRP0 149 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 IL36BQ9NZH7 164 aa4.55□□□□□ -1.68
CD44-214ENST00000525211 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
CD44-214ENST00000525211 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 A0A087WWL8 130 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 LYRM9A8MSI8 78 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 M0R2P5 195 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 M0R381 172 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 RS1O15537 224 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 NXPH4O95158 308 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 CRYGDP07320 174 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 CXCL1P09341 107 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 P0DMU3 169 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 FAM231AP0DMU4 169 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 FAM231CP0DMU5 169 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
CD44-214ENST00000525211 LINC00315P59091 139 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 FHL2Q14192 279 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 ZNF876PQ49A33 203 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 XP32Q5T750 250 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 CFAP126Q5VTH2 177 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 FER1L6-AS1Q8NA97 138 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 OR10G8Q8NGN5 311 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 MUC7Q8TAX7 377 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
CD44-214ENST00000525211 RASL10AQ92737 203 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 DAZAP1Q96EP5 407 aaKnown RBP4.54□□□□□ -1.68
CD44-214ENST00000525211 VSIG2Q96IQ7 327 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 PGLYRP4Q96LB8 373 aa4.54□□□□□ -1.68
CD44-214ENST00000525211 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms