RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 SMCPP49901 116 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 FAM27E3Q08E93 113 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 ERCC8Q13216 396 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 Q6ZUT4 128 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 TEN1Q86WV5 123 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 WFDC3Q8IUB2 231 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 SYT8Q8NBV8 401 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 LINC01560Q8TB33 94 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 CFHR4Q92496 578 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 FANCD2OSQ96PS1 177 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 TTTY13Q9BZ97 58 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 PGPEP1Q9NXJ5 209 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 MSRB1Q9NZV6 116 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 SMAD5-AS1Q9Y6J3 95 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 C2CD3Q4AC94 2353 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 CUBNO60494 3623 aa3.81□□□□□ -1.8
CTNNA1-241ENST00000524127 FN1P02751 2386 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 CD7P09564 240 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 APELAP0DMC3 54 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 COX6B1P14854 86 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 ASIPP42127 132 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 INSL3P51460 131 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 HERVK_113P61574 105 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 ATP5G2Q06055 141 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 AMTNQ6UX39 209 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 DYNAPQ8N1N2 210 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 LY6G5BQ8NDX9 201 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 CCL17Q92583 94 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 DPM3Q9P2X0 92 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 SELENOKQ9Y6D0 94 aa3.8□□□□□ -1.8
CTNNA1-241ENST00000524127 NSD1Q96L73 2696 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 CR1P17927 2039 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 IGKV3D-20A0A0C4DH25 116 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 IGHV7-4-1A0A0J9YVY3 117 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 A8MWV9 139 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 ODF3BA8MYP8 253 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 B9A039 149 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 TIMM23O14925 209 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 GAS8-AS1O95177 125 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 CLEC3BP05452 202 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 CTSGP08311 255 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 ZNF688P0C7X2 276 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 SRD5A1P18405 259 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 GAGE5Q13069 117 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 GAGE6Q13070 117 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 EBI3Q14213 229 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 MRPL23Q16540 153 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 Q6Q795 121 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 C9orf47Q6ZRZ4 202 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 NFE4Q86UQ8 179 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 Q8N6K4 173 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 Q8TAT8 98 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 CARD19Q96LW7 228 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 CITED1Q99966 193 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 DYNLRB1Q9NP97 96 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 MALRD1Q5VYJ5 2156 aa3.79□□□□□ -1.8
CTNNA1-241ENST00000524127 TRBV7-9A0A0J9YWB2 115 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 PRSS29PA6NIE9 313 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 M0R1W7 72 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 BUB3O43684 328 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 TRGV3P03979 118 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 P0DMU3 169 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 FAM231AP0DMU4 169 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 FAM231CP0DMU5 169 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 COX7A1P24310 79 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 HLA-DMBP28068 263 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 PSMB2P49721 201 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 XGP55808 180 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 SUMO2P61956 95 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 BSPH1Q075Z2 132 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 Q5PR19 223 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 SPANXN1Q5VSR9 72 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 ZFAND6Q6FIF0 208 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 C1orf122Q6ZSJ8 110 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 NDUFA11Q86Y39 141 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 KRTAP1-3Q8IUG1 177 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 BAALCQ8WXS3 180 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 AGPAT4-IT1Q9H0P7 198 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 DPH3P1Q9H4G8 78 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 ZFAND3Q9H8U3 227 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 C11orf21Q9P2W6 132 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 U3KQE9 123 aa3.78□□□□□ -1.8
CTNNA1-241ENST00000524127 NIPBLQ6KC79 2804 aaeCLIP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms