RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 LELP1Q5T871 98 aa12.55□□□□□ -0.4
PTP4A3-206ENST00000524028 FRZBQ92765 325 aa12.55□□□□□ -0.4
PTP4A3-206ENST00000524028 LINC00479Q96M42 142 aa12.55□□□□□ -0.4
PTP4A3-206ENST00000524028 Q9HAA7 133 aa12.55□□□□□ -0.4
PTP4A3-206ENST00000524028 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
PTP4A3-206ENST00000524028 CXorf1O96002 111 aa12.54□□□□□ -0.4
PTP4A3-206ENST00000524028 SERF2P84101 59 aa12.54□□□□□ -0.4
PTP4A3-206ENST00000524028 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
PTP4A3-206ENST00000524028 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 MBP02144 154 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 Q8N3U1 123 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 Q8N814 137 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 ATP6V0E2Q8NHE4 81 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 TMEM167BQ9NRX6 74 aa12.53□□□□□ -0.4
PTP4A3-206ENST00000524028 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 MGST1P10620 155 aaKnown RBP12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 PARLQ9H300 379 aa12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 TNFSF18Q9UNG2 199 aa12.52□□□□□ -0.41
PTP4A3-206ENST00000524028 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 MED28Q9H204 178 aa12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 Q9UF83 564 aa12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 DMBT1Q9UGM3 2413 aaPredicted RBP12.51□□□□□ -0.41
PTP4A3-206ENST00000524028 A0A1W2PRE2 83 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 RPL7L1Q6DKI1 246 aaKnown RBP12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 TMEM70Q9BUB7 260 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 JPT2Q9H910 190 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 MYCBP2O75592 4640 aa12.5□□□□□ -0.41
PTP4A3-206ENST00000524028 GAGE12JA6NER3 117 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 GAGE1Q13065 139 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 GAGE4Q13068 117 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 GAGE5Q13069 117 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 WFDC2Q14508 124 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 GAGE13Q4V321 117 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
PTP4A3-206ENST00000524028 RNF222A6NCQ9 220 aa12.48□□□□□ -0.41
PTP4A3-206ENST00000524028 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
PTP4A3-206ENST00000524028 OR2T35Q8NGX2 323 aa12.48□□□□□ -0.41
PTP4A3-206ENST00000524028 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 A8MWV9 139 aa12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 CRIP1P50238 77 aa12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 UBE2G2P60604 165 aa12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 LAGE3Q14657 143 aa12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
PTP4A3-206ENST00000524028 FAM229AH3BQW9 127 aa12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 PTTG1O95997 202 aa12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 IFNA7P01567 189 aa12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 ASIPP42127 132 aa12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 PIK3CD-AS1Q5SR53 167 aa12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 C14orf178Q8N769 122 aaPredicted RBP12.46□□□□□ -0.41
PTP4A3-206ENST00000524028 FLG2Q5D862 2391 aaPredicted RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 PEX7O00628 323 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 DAZ4Q86SG3 579 aaKnown RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 Q86TA4 180 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 INO80EQ8NBZ0 244 aaPredicted RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 ZC2HC1AQ96GY0 325 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 DAZ3Q9NR90 486 aaKnown RBP12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 IL36BQ9NZH7 164 aa12.45□□□□□ -0.42
PTP4A3-206ENST00000524028 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
PTP4A3-206ENST00000524028 B4DEV8 164 aa12.44□□□□□ -0.42
PTP4A3-206ENST00000524028 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
PTP4A3-206ENST00000524028 H3BVH4 76 aa12.44□□□□□ -0.42
PTP4A3-206ENST00000524028 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
PTP4A3-206ENST00000524028 FXYD6-FXYD2A0A087WZ82 144 aa12.43□□□□□ -0.42
PTP4A3-206ENST00000524028 BORCS7-ASMTA0A0B4J1R7 106 aa12.43□□□□□ -0.42
PTP4A3-206ENST00000524028 LECT2O14960 151 aa12.43□□□□□ -0.42
PTP4A3-206ENST00000524028 GRIFINA4D1Z8 144 aa12.42□□□□□ -0.42
PTP4A3-206ENST00000524028 M0R036 132 aa12.42□□□□□ -0.42
PTP4A3-206ENST00000524028 ARMS2P0C7Q2 107 aa12.42□□□□□ -0.42
PTP4A3-206ENST00000524028 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
PTP4A3-206ENST00000524028 COX8CQ7Z4L0 72 aa12.42□□□□□ -0.42
PTP4A3-206ENST00000524028 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 SH2D1AO60880 128 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 C1QBP02746 253 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 BATF3Q9NR55 127 aa12.41□□□□□ -0.42
PTP4A3-206ENST00000524028 G3V3Q6 166 aa12.4□□□□□ -0.42
PTP4A3-206ENST00000524028 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
PTP4A3-206ENST00000524028 A0A087WWC5 75 aa12.39□□□□□ -0.43
PTP4A3-206ENST00000524028 A0A087WWL8 130 aa12.39□□□□□ -0.43
PTP4A3-206ENST00000524028 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
PTP4A3-206ENST00000524028 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms