RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 F8VRH5 84 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 K7EMI3 77 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 K7ERU9 68 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 MGPP08493 103 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 DAZ1Q9NQZ3 744 aaKnown RBP8.34□□□□□ -1.07
HDAC9-228ENST00000524023 SPCS1Q9Y6A9 102 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 SPG11Q96JI7 2443 aa8.34□□□□□ -1.07
HDAC9-228ENST00000524023 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.08
HDAC9-228ENST00000524023 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.08
HDAC9-228ENST00000524023 FLNCQ14315 2725 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 MSMBP08118 114 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 FABP2P12104 132 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 SRD5A1P18405 259 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 ATP5J2P56134 94 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 CFHR3Q02985 330 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 OR5A1Q8NGJ0 315 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 PHLDA1Q8WV24 401 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-228ENST00000524023 VPS25Q9BRG1 176 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
HDAC9-228ENST00000524023 AGRNO00468 2067 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-228ENST00000524023 PKD1L2Q7Z442 2459 aa8.33□□□□□ -1.08
HDAC9-228ENST00000524023 K7ERJ3 54 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 NXPH4O95158 308 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 EDN2P20800 178 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 C2orf66Q6UXQ4 117 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 NHP2Q9NX24 153 aaKnown RBP8.32□□□□□ -1.08
HDAC9-228ENST00000524023 KLLNB2CW77 178 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 K7EMT4 169 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 SAP30O75446 220 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 PPP1R17O96001 155 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 TAL2Q16559 108 aa8.32□□□□□ -1.08
HDAC9-228ENST00000524023 AVPP01185 164 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 KIF25-AS1Q9Y6Z4 181 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 ID1P41134 155 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 LINC00315P59091 139 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
HDAC9-228ENST00000524023 OR11H12B2RN74 326 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 TMEM95Q3KNT9 176 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 OR11H1Q8NG94 326 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 OR11H2Q8NH07 326 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 CSPG4Q6UVK1 2322 aa8.3□□□□□ -1.08
HDAC9-228ENST00000524023 UTP20O75691 2785 aaKnown RBP8.3□□□□□ -1.08
HDAC9-228ENST00000524023 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 A0A087WW49 117 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 PRSS29PA6NIE9 313 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 B4DSR2 109 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
HDAC9-228ENST00000524023 SAMD13Q5VXD3 122 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 WFDC12Q8WWY7 111 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 HIST1H4GQ99525 98 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 DOPEY1Q5JWR5 2465 aa8.29□□□□□ -1.08
HDAC9-228ENST00000524023 TRBV7-3A0A075B6L6 115 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 LINC01619G3V211 115 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 PSMB8P28062 276 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 JPT2Q9H910 190 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 USP9XQ93008 2570 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-228ENST00000524023 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 IGLL5B9A064 214 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 E9PLD3 99 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 G3V4G9 280 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 DUSP14O95147 198 aaKnown RBP8.28□□□□□ -1.08
HDAC9-228ENST00000524023 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
HDAC9-228ENST00000524023 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
HDAC9-228ENST00000524023 CD7P09564 240 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 SUMO4Q6EEV6 95 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 CYSLTR1Q9Y271 337 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 TSHBP01222 138 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 CRYGDP07320 174 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 LGALS1P09382 135 aaKnown RBP8.27□□□□□ -1.09
HDAC9-228ENST00000524023 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
HDAC9-228ENST00000524023 IGSF10Q6WRI0 2623 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 A0A087WWL8 130 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 GATA3P23771 443 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 C10orf99Q6UWK7 81 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 ZFP2Q6ZN57 461 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 TP53TG1Q9Y2A0 90 aa8.26□□□□□ -1.09
HDAC9-228ENST00000524023 VCYO14598 125 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 DEFB112Q30KQ8 113 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 ODF3Q96PU9 254 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 A0A0J9YX75 114 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 IGIPA6NJ69 53 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 F5H697 171 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 FOXI2Q6ZQN5 318 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 C9orf85Q96MD7 179 aa8.25□□□□□ -1.09
HDAC9-228ENST00000524023 ZANQ9Y493 2812 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms