RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 PRR27Q6MZM9 219 aa11.33□□□□□ -0.6
TRAPPC9-214ENST00000523777 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
TRAPPC9-214ENST00000523777 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 RAB19A4D1S5 217 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 A8MWV9 139 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
TRAPPC9-214ENST00000523777 H3BVH4 76 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 PAX4O43316 350 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 IGHV3-53P01767 116 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 CCL18P55774 89 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 FHL2Q14192 279 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 POM121L12Q8N7R1 296 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 PARLQ9H300 379 aa11.31□□□□□ -0.6
TRAPPC9-214ENST00000523777 A0A0J9YY99 117 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 RS1O15537 224 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 CRYBA4P53673 196 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 RAB14P61106 215 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 LY96Q9Y6Y9 160 aa11.3□□□□□ -0.6
TRAPPC9-214ENST00000523777 TRBV20OR9-2A0A075B6H5 130 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 P01737 135 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 SFTA3P0C7M3 94 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 PEA15Q15121 130 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 PCNPQ8WW12 178 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 ICOSQ9Y6W8 199 aa11.29□□□□□ -0.6
TRAPPC9-214ENST00000523777 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
TRAPPC9-214ENST00000523777 MRPL23Q16540 153 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-214ENST00000523777 CFAP126Q5VTH2 177 aa11.28□□□□□ -0.6
TRAPPC9-214ENST00000523777 ZFP2Q6ZN57 461 aa11.28□□□□□ -0.6
TRAPPC9-214ENST00000523777 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
TRAPPC9-214ENST00000523777 SACSQ9NZJ4 4579 aa11.27□□□□□ -0.6
TRAPPC9-214ENST00000523777 DNAH1Q9P2D7 4330 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 RHODO00212 210 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 OR5AL1P0C617 328 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 CEBPGP53567 150 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 OR2D3Q8NGH3 330 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
TRAPPC9-214ENST00000523777 SNAI2O43623 268 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 PRADC1Q9BSG0 188 aa11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 SSBP4Q9BWG4 385 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-214ENST00000523777 A0A096LPF7 62 aa11.25□□□□□ -0.61
TRAPPC9-214ENST00000523777 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
TRAPPC9-214ENST00000523777 ZNF727A8MUV8 499 aa11.25□□□□□ -0.61
TRAPPC9-214ENST00000523777 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-214ENST00000523777 A0A1W2PPQ1 181 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 F2Z2F3 143 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 M0R381 172 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 RHOHQ15669 191 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 SPANXN1Q5VSR9 72 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 NEGR1Q7Z3B1 354 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 SFRP2Q96HF1 295 aa11.24□□□□□ -0.61
TRAPPC9-214ENST00000523777 NXPH4O95158 308 aa11.23□□□□□ -0.61
TRAPPC9-214ENST00000523777 GYPEP15421 78 aa11.23□□□□□ -0.61
TRAPPC9-214ENST00000523777 SRIP30626 198 aa11.23□□□□□ -0.61
TRAPPC9-214ENST00000523777 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
TRAPPC9-214ENST00000523777 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
TRAPPC9-214ENST00000523777 K7EN84 100 aa11.22□□□□□ -0.61
TRAPPC9-214ENST00000523777 K7EQD1 137 aa11.22□□□□□ -0.61
TRAPPC9-214ENST00000523777 CACNG7P62955 275 aa11.22□□□□□ -0.61
TRAPPC9-214ENST00000523777 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-214ENST00000523777 IGLC6P0CF74 106 aa11.21□□□□□ -0.61
TRAPPC9-214ENST00000523777 TMEM241Q24JQ0 296 aa11.21□□□□□ -0.61
TRAPPC9-214ENST00000523777 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
TRAPPC9-214ENST00000523777 UPK3BQ9BT76 320 aa11.21□□□□□ -0.61
TRAPPC9-214ENST00000523777 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
TRAPPC9-214ENST00000523777 IGHV3-73A0A0B4J1V6 119 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 ESRGQ1W209 222 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 CT83Q5H943 113 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 UFSP1Q6NVU6 142 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 OR10AG1Q8NH19 301 aa11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 RNASE7Q9H1E1 156 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 MRPS16Q9Y3D3 137 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-214ENST00000523777 VPS13DQ5THJ4 4388 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms