RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 MRPS26Q9BYN8 205 aaKnown RBP7.47□□□□□ -1.21
SDCBP-211ENST00000523441 SH3BGRL3Q9H299 93 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 JPT2Q9H910 190 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 LYRM2Q9NU23 88 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-211ENST00000523441 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 LENEPQ9Y5L5 61 aa7.47□□□□□ -1.21
SDCBP-211ENST00000523441 A0A0D9SG52 128 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 S100A5P33763 92 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 NHLH2Q02577 135 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 RAB32Q13637 225 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 PARLQ9H300 379 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 C11orf1Q9H5F2 150 aa7.46□□□□□ -1.22
SDCBP-211ENST00000523441 A0A087WWC5 75 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 H3BMQ9 156 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 CRPP02741 224 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 PRSS1P07477 247 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
SDCBP-211ENST00000523441 ATP6V1FQ16864 119 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 C15orf54Q8N8G6 183 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 OR5C1Q8NGR4 320 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
SDCBP-211ENST00000523441 TRAV6A0A075B6T7 132 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 NAP1L6A6NFF2 107 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 CIDEAO60543 219 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 SEC11BP0C7V7 166 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 TMBIM6P55061 237 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 ELOBQ15370 118 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 FAM74A4Q5TZK3 123 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 OR2G3Q8NGZ4 309 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 C9orf85Q96MD7 179 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 MBD2Q9UBB5 411 aa7.44□□□□□ -1.22
SDCBP-211ENST00000523441 GCGP01275 180 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 CHTF8P0CG12 524 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 LINC00694P0DN24 101 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 S100A4P26447 101 aaKnown RBP7.43□□□□□ -1.22
SDCBP-211ENST00000523441 FAM74A1Q5RGS3 127 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 HSD17B11Q8NBQ5 300 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 CHAC2Q8WUX2 184 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 DEDD2Q8WXF8 326 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 NDFIP1Q9BT67 221 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 OTORQ9NRC9 128 aa7.43□□□□□ -1.22
SDCBP-211ENST00000523441 CCDC160A6NGH7 325 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 CENPXA8MT69 81 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 HMGB3O15347 200 aaKnown RBP7.42□□□□□ -1.22
SDCBP-211ENST00000523441 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
SDCBP-211ENST00000523441 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
SDCBP-211ENST00000523441 BTCP35070 178 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 FGF8P55075 233 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-211ENST00000523441 Q0VG73 95 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 KHDC3LQ587J8 217 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 ENHOQ6UWT2 76 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 TMED6Q8WW62 240 aa7.42□□□□□ -1.22
SDCBP-211ENST00000523441 A0A087WWL8 130 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 A8MWV9 139 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 C17orf112F2Z3M2 114 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 TAAR5O14804 337 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 PHOX2AO14813 284 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
SDCBP-211ENST00000523441 LPAP08519 4548 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 TAS2R45P59539 299 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 LRRC37A5PQ49AS3 106 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 WDR61Q9GZS3 305 aaKnown RBP7.4□□□□□ -1.22
SDCBP-211ENST00000523441 KCNIP2Q9NS61 270 aa7.4□□□□□ -1.22
SDCBP-211ENST00000523441 A0A087WYN8 130 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 H3BVH4 76 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 ZFP69Q49AA0 526 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 MPV17L2Q567V2 206 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 ATRAIDQ6UW56 229 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 SDIM1Q6ZPB5 146 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 OR10G9Q8NGN4 311 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 LINC00479Q96M42 142 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 KIF25-AS1Q9Y6Z4 181 aa7.39□□□□□ -1.23
SDCBP-211ENST00000523441 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
SDCBP-211ENST00000523441 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
SDCBP-211ENST00000523441 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
SDCBP-211ENST00000523441 OR5AC2Q9NZP5 309 aa7.38□□□□□ -1.23
SDCBP-211ENST00000523441 PSG8Q9UQ74 426 aa7.38□□□□□ -1.23
SDCBP-211ENST00000523441 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 SIX6O95475 246 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 SMUG1Q53HV7 270 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 LYPD6BQ8NI32 183 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 C7orf33Q8WU49 177 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
SDCBP-211ENST00000523441 A0A1W2PPV4 95 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 GRIFINA4D1Z8 144 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 M0R036 132 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 M0R381 172 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 RAB5CP51148 216 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 RPL36AP83881 106 aaKnown RBP7.36□□□□□ -1.23
SDCBP-211ENST00000523441 RPL19P84098 196 aaKnown RBP7.36□□□□□ -1.23
SDCBP-211ENST00000523441 UFSP1Q6NVU6 142 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 OR10G7Q8NGN6 311 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 RPL36ALQ969Q0 106 aaKnown RBP7.36□□□□□ -1.23
SDCBP-211ENST00000523441 CHCHD7Q9BUK0 85 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms