RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 IGKV3D-20A0A0C4DH25 116 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 AKR1C3P42330 323 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 CRIP1P50238 77 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 OR4C5Q8NGB2 326 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 C9orf85Q96MD7 179 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 ICOSQ9Y6W8 199 aa11.34□□□□□ -0.59
PABPC1-221ENST00000522720 BIRC6Q9NR09 4857 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 LTAP01374 205 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 S100A9P06702 114 aaKnown RBP11.33□□□□□ -0.6
PABPC1-221ENST00000522720 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
PABPC1-221ENST00000522720 TOR2AQ5JU69 321 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 COMMD7Q86VX2 200 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 PTH2Q96A98 100 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
PABPC1-221ENST00000522720 C9JCJ5 164 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 RTL8CO15255 209 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 ORM1P02763 201 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
PABPC1-221ENST00000522720 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 UPK3BQ9BT76 320 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 Q9H8V8 135 aa11.32□□□□□ -0.6
PABPC1-221ENST00000522720 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
PABPC1-221ENST00000522720 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
PABPC1-221ENST00000522720 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
PABPC1-221ENST00000522720 SH2D1AO60880 128 aa11.31□□□□□ -0.6
PABPC1-221ENST00000522720 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
PABPC1-221ENST00000522720 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 B4DEV8 164 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 KRBOX1C9JBD0 128 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 RS1O15537 224 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 CIDEAO60543 219 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
PABPC1-221ENST00000522720 FAT2Q9NYQ8 4349 aa11.3□□□□□ -0.6
PABPC1-221ENST00000522720 ASIPP42127 132 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 CFAP126Q5VTH2 177 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 ZNF575Q86XF7 245 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
PABPC1-221ENST00000522720 K7EQD1 137 aa11.28□□□□□ -0.6
PABPC1-221ENST00000522720 M0R036 132 aa11.28□□□□□ -0.6
PABPC1-221ENST00000522720 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
PABPC1-221ENST00000522720 GYPEP15421 78 aa11.28□□□□□ -0.6
PABPC1-221ENST00000522720 GATA1P15976 413 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-221ENST00000522720 FAM74A3Q4VXF1 159 aa11.28□□□□□ -0.6
PABPC1-221ENST00000522720 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
PABPC1-221ENST00000522720 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
PABPC1-221ENST00000522720 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
PABPC1-221ENST00000522720 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
PABPC1-221ENST00000522720 NHLRC2Q8NBF2 726 aa11.27□□□□□ -0.61
PABPC1-221ENST00000522720 H3BVH4 76 aa11.26□□□□□ -0.61
PABPC1-221ENST00000522720 SRIP30626 198 aa11.26□□□□□ -0.61
PABPC1-221ENST00000522720 TMEM218A2RU14 115 aa11.25□□□□□ -0.61
PABPC1-221ENST00000522720 GRIFINA4D1Z8 144 aa11.25□□□□□ -0.61
PABPC1-221ENST00000522720 ARMS2P0C7Q2 107 aa11.25□□□□□ -0.61
PABPC1-221ENST00000522720 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
PABPC1-221ENST00000522720 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
PABPC1-221ENST00000522720 TTC32Q5I0X7 151 aa11.25□□□□□ -0.61
PABPC1-221ENST00000522720 HECTD4Q9Y4D8 3996 aa11.25□□□□□ -0.61
PABPC1-221ENST00000522720 TMSB15BA0A087X1C1 80 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 A0A1W2PPQ1 181 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 A8MWV9 139 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 CEBPGP53567 150 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 SH2D6Q7Z4S9 175 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 BIN3Q9NQY0 253 aa11.24□□□□□ -0.61
PABPC1-221ENST00000522720 LOC100131303A0A0U1RQF7 123 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 A0A1B0GVY2 172 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 SIVA1O15304 175 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 NXPH4O95158 308 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 MGST1P10620 155 aaKnown RBP11.23□□□□□ -0.61
PABPC1-221ENST00000522720 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 SYT8Q8NBV8 401 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 SMIM12Q96EX1 92 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 KRTAP1-5Q9BYS1 174 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 PARLQ9H300 379 aa11.23□□□□□ -0.61
PABPC1-221ENST00000522720 C9JQL5 133 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 GNG4P50150 75 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 RHOHQ15669 191 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 TMEM241Q24JQ0 296 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 SMIM7Q9BQ49 75 aa11.22□□□□□ -0.61
PABPC1-221ENST00000522720 SEC11CQ9BY50 192 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms